Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M16
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   4.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   6.5  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 22/90 (24%), Positives = 32/90 (35%)
 Frame = +3

Query: 372 GQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELRSRDFRKELDDREKDVKTTT 551
           G G G    S  S  Y+     G     Y +     S +      R+E   +E+      
Sbjct: 21  GIGLGLGYTSFQSAGYNKLFTQGSADSNYSQPSSDLSLDEEKESLRRE---KERQALGQL 77

Query: 552 TKRTSEPQAKRTKVDQVPAASLDADDPLEG 641
            K  S+P A   + +     SLD D P+ G
Sbjct: 78  EKARSKPVAFAVRTNVSYDGSLDDDSPVHG 107


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 357  DPARGGQGRGEKDLSAISRQYSSR 428
            + A+ G G GEK L+ I R+  +R
Sbjct: 1089 EDAKSGSGVGEKTLNEILRELEAR 1112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,171
Number of Sequences: 2352
Number of extensions: 11985
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)