Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M16
         (823 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069693-1|AAL39838.1|  259|Drosophila melanogaster LD46621p pro...   147   1e-35
AF217651-3|AAF35309.1|  259|Drosophila melanogaster c12.1 protein.    147   1e-35
AE014298-1327|AAF46488.1|  259|Drosophila melanogaster CG12135-P...   147   1e-35
AY061268-1|AAL28816.1|  255|Drosophila melanogaster LD19544p pro...    33   0.36 
AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p pro...    33   0.36 
AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA...    33   0.36 
AE014134-3258|AAF53905.1|  255|Drosophila melanogaster CG2608-PA...    33   0.36 
AE013599-3643|AAO41346.1|  265|Drosophila melanogaster CG17664-P...    31   2.5  
AE013599-3642|AAF47034.2|  265|Drosophila melanogaster CG17664-P...    31   2.5  
AE014297-3327|AAF56136.1|  858|Drosophila melanogaster CG4374-PA...    30   4.4  
AY113652-1|AAM29657.1|  918|Drosophila melanogaster SD14970p pro...    29   7.7  
AE014296-1695|AAF50237.1|  918|Drosophila melanogaster CG3335-PA...    29   7.7  

>AY069693-1|AAL39838.1|  259|Drosophila melanogaster LD46621p
           protein.
          Length = 259

 Score =  147 bits (357), Expect = 1e-35
 Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 33/195 (16%)
 Frame = +3

Query: 330 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELRSRDFR 509
           MTTAARPTFDPARGG GRGEKDLSA+S+QYSSRDLPGHTKLKYRE+GQGTS+E R+RDFR
Sbjct: 1   MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDENRNRDFR 60

Query: 510 KELDDREKDVKTTTTKRTS----------------------EPQAKRTKVD--------- 596
           KEL++RE++ ++ T   +S                         AKR+K D         
Sbjct: 61  KELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGGGSSAAKRSKPDAGQQQAQQA 120

Query: 597 -QVPAASLDADDPLEG-XXXXXXXXXXXXAALLAELNRXXXXXXXXXXXXXXXXXXXXXX 770
            Q  AA++DAD+PL+              AALLAEL +                      
Sbjct: 121 AQQQAANMDADEPLDNDSSDSDSDSDDDDAALLAELQKIKQERLQETARRESEKKQEDER 180

Query: 771 XXMENILSGNPLLNY 815
             MENILSGNPL+NY
Sbjct: 181 IRMENILSGNPLMNY 195


>AF217651-3|AAF35309.1|  259|Drosophila melanogaster c12.1 protein.
          Length = 259

 Score =  147 bits (357), Expect = 1e-35
 Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 33/195 (16%)
 Frame = +3

Query: 330 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELRSRDFR 509
           MTTAARPTFDPARGG GRGEKDLSA+S+QYSSRDLPGHTKLKYRE+GQGTS+E R+RDFR
Sbjct: 1   MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDENRNRDFR 60

Query: 510 KELDDREKDVKTTTTKRTS----------------------EPQAKRTKVD--------- 596
           KEL++RE++ ++ T   +S                         AKR+K D         
Sbjct: 61  KELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGGGSSAAKRSKPDAGQQQAQQA 120

Query: 597 -QVPAASLDADDPLEG-XXXXXXXXXXXXAALLAELNRXXXXXXXXXXXXXXXXXXXXXX 770
            Q  AA++DAD+PL+              AALLAEL +                      
Sbjct: 121 AQQQAANMDADEPLDNDSSDSDSDSDDDDAALLAELQKIKQERLQETARRESEKKQEDER 180

Query: 771 XXMENILSGNPLLNY 815
             MENILSGNPL+NY
Sbjct: 181 IRMENILSGNPLMNY 195


>AE014298-1327|AAF46488.1|  259|Drosophila melanogaster CG12135-PA
           protein.
          Length = 259

 Score =  147 bits (357), Expect = 1e-35
 Identities = 92/195 (47%), Positives = 111/195 (56%), Gaps = 33/195 (16%)
 Frame = +3

Query: 330 MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELRSRDFR 509
           MTTAARPTFDPARGG GRGEKDLSA+S+QYSSRDLPGHTKLKYRE+GQGTS+E R+RDFR
Sbjct: 1   MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDENRNRDFR 60

Query: 510 KELDDREKDVKTTTTKRTS----------------------EPQAKRTKVD--------- 596
           KEL++RE++ ++ T   +S                         AKR+K D         
Sbjct: 61  KELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGGGSSAAKRSKPDAGQQQAQQA 120

Query: 597 -QVPAASLDADDPLEG-XXXXXXXXXXXXAALLAELNRXXXXXXXXXXXXXXXXXXXXXX 770
            Q  AA++DAD+PL+              AALLAEL +                      
Sbjct: 121 AQQQAANMDADEPLDNDSSDSDSDSDDDDAALLAELQKIKQERLQETARRESEKKQEDER 180

Query: 771 XXMENILSGNPLLNY 815
             MENILSGNPL+NY
Sbjct: 181 IRMENILSGNPLMNY 195


>AY061268-1|AAL28816.1|  255|Drosophila melanogaster LD19544p
           protein.
          Length = 255

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 384 GEKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELR---SRDFRKELDDREKDVKTTTT 554
           G +D+   S  Y     PG  ++  R +G G +EE+    +   R+ L   + D + +T+
Sbjct: 93  GREDVDRHSVVYKKEHAPGEDEVTARRNGDGWNEEIAKEYAERRRERLAQEQSDKEASTS 152

Query: 555 KRTSEPQAKRTKVDQ 599
           +  S   +  T  DQ
Sbjct: 153 EAASSGSSTSTSADQ 167


>AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p
           protein.
          Length = 478

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 20/70 (28%), Positives = 38/70 (54%)
 Frame = +3

Query: 387 EKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELRSRDFRKELDDREKDVKTTTTKRTS 566
           +K   A   +   ++L   T+LK R+  Q T++ +R +  R ELDD E+D+     K+  
Sbjct: 313 KKSKQARRNELKQKELARQTELK-RKLKQQTADLIRIKSIRHELDDEEEDL--NDLKKRR 369

Query: 567 EPQAKRTKVD 596
           + +A++ K +
Sbjct: 370 KQRAEKAKFE 379


>AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA
           protein.
          Length = 478

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 20/70 (28%), Positives = 38/70 (54%)
 Frame = +3

Query: 387 EKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELRSRDFRKELDDREKDVKTTTTKRTS 566
           +K   A   +   ++L   T+LK R+  Q T++ +R +  R ELDD E+D+     K+  
Sbjct: 313 KKSKQARRNELKQKELARQTELK-RKLKQQTADLIRIKSIRHELDDEEEDL--NDLKKRR 369

Query: 567 EPQAKRTKVD 596
           + +A++ K +
Sbjct: 370 KQRAEKAKFE 379


>AE014134-3258|AAF53905.1|  255|Drosophila melanogaster CG2608-PA
           protein.
          Length = 255

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 384 GEKDLSAISRQYSSRDLPGHTKLKYRESGQGTSEELR---SRDFRKELDDREKDVKTTTT 554
           G +D+   S  Y     PG  ++  R +G G +EE+    +   R+ L   + D + +T+
Sbjct: 93  GREDVDRHSVVYKKEHAPGEDEVTARRNGDGWNEEIAKEYAERRRERLAQEQSDKEASTS 152

Query: 555 KRTSEPQAKRTKVDQ 599
           +  S   +  T  DQ
Sbjct: 153 EAASSGSSTSTSADQ 167


>AE013599-3643|AAO41346.1|  265|Drosophila melanogaster CG17664-PB,
           isoform B protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 504 FRKELDDREKDVKTTTTKRTSEPQ 575
           FR+EL++ E D  T +TKRTSE +
Sbjct: 240 FRRELEESEVDETTMSTKRTSEAE 263


>AE013599-3642|AAF47034.2|  265|Drosophila melanogaster CG17664-PA,
           isoform A protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 504 FRKELDDREKDVKTTTTKRTSEPQ 575
           FR+EL++ E D  T +TKRTSE +
Sbjct: 240 FRRELEESEVDETTMSTKRTSEAE 263


>AE014297-3327|AAF56136.1|  858|Drosophila melanogaster CG4374-PA
           protein.
          Length = 858

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 22/75 (29%), Positives = 32/75 (42%)
 Frame = +3

Query: 411 RQYSSRDLPGHTKLKYRESGQGTSEELRSRDFRKELDDREKDVKTTTTKRTSEPQAKRTK 590
           +Q   +  P         SG G+S +  S      LD  +  + T T     EP  KR++
Sbjct: 223 QQQQQQQQPNANSSSAASSGAGSSSDTIS-----SLDTTDGQIYTLTVLNGGEPWLKRSE 277

Query: 591 VDQVPAASLDADDPL 635
            +Q+P  SLD D  L
Sbjct: 278 SEQLP-TSLDLDSLL 291


>AY113652-1|AAM29657.1|  918|Drosophila melanogaster SD14970p
           protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 495 SRDFRKELDD-REKDVKTTTTKRTSEPQAKRTKVDQV-PAASLDADDP 632
           ++D +K LD  +EK+ +     + SE + K+ KVD+V    S   DDP
Sbjct: 93  AKDSKKNLDKLKEKEREAAAKAKESEKKKKKDKVDKVDQILSRHKDDP 140


>AE014296-1695|AAF50237.1|  918|Drosophila melanogaster CG3335-PA
           protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 495 SRDFRKELDD-REKDVKTTTTKRTSEPQAKRTKVDQV-PAASLDADDP 632
           ++D +K LD  +EK+ +     + SE + K+ KVD+V    S   DDP
Sbjct: 93  AKDSKKNLDKLKEKEREAAAKAKESEKKKKKDKVDKVDQILSRHKDDP 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,740,618
Number of Sequences: 53049
Number of extensions: 466055
Number of successful extensions: 1595
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)