Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_M15
(814 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0098 - 12844631-12845074,12845329-12846570 145 4e-35
02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785 48 1e-05
05_04_0094 + 17888998-17889589,17889668-17889795,17889879-178901... 45 8e-05
01_07_0131 + 41292800-41293400,41293522-41293649,41293759-412940... 45 8e-05
02_02_0092 + 6686658-6687246,6687343-6687749,6687875-6688378,668... 44 1e-04
01_06_0894 - 32781957-32782287,32783019-32783284,32783771-327840... 40 0.002
06_03_0532 - 21844213-21844252,21844579-21844836,21845303-218455... 40 0.003
01_01_0624 - 4696314-4696608,4696704-4697394,4699525-4699540,469... 39 0.004
04_04_0548 + 26172595-26173189,26173346-26173473,26173606-261738... 37 0.017
01_01_0688 - 5267781-5267814,5269851-5270153,5270605-5270870,527... 37 0.017
10_08_0414 + 17755427-17756000,17756181-17756308,17756434-177566... 36 0.038
08_02_0917 - 22609543-22609852,22609925-22610266,22610596-226108... 36 0.051
04_04_0106 + 22823781-22823878,22824887-22825325,22825578-228257... 31 0.82
04_03_0930 - 20891334-20891511,20891958-20892109,20892737-208931... 31 0.82
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 30 1.9
05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330 30 1.9
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 30 2.5
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 29 4.4
05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826... 29 5.8
04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656... 29 5.8
02_01_0384 - 2781362-2782299,2782320-2782428 29 5.8
12_02_0071 + 13207111-13207280,13208100-13208251,13208728-13208903 28 7.7
07_03_1107 - 24024387-24024497,24025799-24026410 28 7.7
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548... 28 7.7
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 28 7.7
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 145 bits (351), Expect = 4e-35
Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 7/232 (3%)
Frame = +3
Query: 105 ETFLEYLVVEYRWVIVILALLPMSAAWKLWSIIRNYVVFKMNSAP---KMHDDKVKEVQR 275
+ ++YLV ++RW++VI +LP+SA ++I V M S K HDD V++V +
Sbjct: 15 KVLVDYLV-KFRWILVIFVVLPISALI-YFNIYLGDVWSAMKSEKRRQKEHDDNVQKVVK 72
Query: 276 QIKEWLSGDKSTHLCTARPTWQTMSFRHSMYKRTFTNIQINLV---DVLEVDKENMTVRC 446
++K+ + K +CTAR W + R+ YKR + +++L ++LE+D+E M +
Sbjct: 73 RLKQ-RNPKKDGLVCTARKPWIAVGMRNVDYKRA-RHFEVDLSAFRNILEIDRERMVAKV 130
Query: 447 EPLVTMGQLSRTXXXXXXXXXXXXXXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELV 626
EPLV MGQ++R D L SH++GLF + E+V
Sbjct: 131 EPLVNMGQITRATCPMNLALAVVAELDDLTVGGLINGYGIEGSSHLYGLFSDTVVAVEVV 190
Query: 627 LADGSVVNCSKD-ENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVRIHYYP 779
LADG VV +KD E +DLFY +PWS GTLGFL S IK+IP +Y+R+ Y P
Sbjct: 191 LADGRVVRATKDNEYSDLFYGIPWSQGTLGFLVSAEIKLIPIKEYMRLTYTP 242
>02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785
Length = 524
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +3
Query: 609 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVR 764
LE +++ G +V CS+D+++DLF+AV G G +T I ++PA K VR
Sbjct: 187 LELDVITGTGDMVTCSRDKDSDLFFAVLGGLGQFGIITRARIGLMPAPKRVR 238
>05_04_0094 +
17888998-17889589,17889668-17889795,17889879-17890139,
17890241-17890503,17890588-17890909
Length = 521
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 612 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVR 764
E E+V G V+ CS ++N+DLF+A G G +T I + PA K VR
Sbjct: 192 ELEIVTGRGDVITCSPEQNSDLFHAALGGLGQFGVITRARIPLEPAPKMVR 242
>01_07_0131 +
41292800-41293400,41293522-41293649,41293759-41294019,
41294154-41294416,41294507-41294831
Length = 525
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +3
Query: 612 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVR 764
+ E+V G VV CS + N+DLFYA G G +T I + PA K VR
Sbjct: 195 QLEIVTGRGEVVTCSHEVNSDLFYAALGGLGQFGIITRARIALEPAPKMVR 245
>02_02_0092 +
6686658-6687246,6687343-6687749,6687875-6688378,
6688935-6688940
Length = 501
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 609 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVR 764
LE +++ G +V CS+D+ DLF+AV G G +T I + PA K VR
Sbjct: 190 LELDVITGRGDMVTCSRDKEPDLFFAVLGGLGQFGIITRARIGLEPAPKRVR 241
>01_06_0894 -
32781957-32782287,32783019-32783284,32783771-32784040,
32785007-32785134,32785284-32785893
Length = 534
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 612 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVR 764
E ++V G VV CS+ N DLF+ G LG +T I + PA VR
Sbjct: 198 ELDVVTGKGEVVTCSESNNPDLFFGALGGLGQLGIITRARIALEPAPHRVR 248
>06_03_0532 -
21844213-21844252,21844579-21844836,21845303-21845568,
21845963-21846369,21846528-21847143
Length = 528
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +3
Query: 612 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPA---XKYVRIHY--- 773
E ++V G ++ CS + N+ LF+AV G G +T I++ PA K+VRI Y
Sbjct: 200 ELDVVTGMGEMITCSPEVNSALFFAVLGGLGQFGVITRARIRLEPAPKRVKWVRIAYSDV 259
Query: 774 YPFNNLSDL 800
+PF +L
Sbjct: 260 HPFTTDQEL 268
>01_01_0624 -
4696314-4696608,4696704-4697394,4699525-4699540,
4699577-4699630,4699741-4699809
Length = 374
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +3
Query: 594 FQHVCLEYELVLAD-GSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPA---XKYV 761
F+H+ L ++ + G V CSK N+DLF AV G G +T + V PA ++V
Sbjct: 34 FEHIFLPQDMSQSGHGETVTCSKAVNSDLFDAVLGGLGQFGVITRARVAVEPAPARARWV 93
Query: 762 RIHYYPF 782
R+ Y F
Sbjct: 94 RLVYADF 100
>04_04_0548 +
26172595-26173189,26173346-26173473,26173606-26173866,
26173988-26174250,26176748-26177099
Length = 532
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 609 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKV---IPAXKYVRIHYYP 779
L+ E+V G VV CS E +LF+AV G G +T I + P ++VR Y
Sbjct: 192 LQLEVVTGKGEVVTCSPTEIPELFFAVLGGLGQFGIITRARIPLQLAPPKVRWVRAFYDS 251
Query: 780 FNNLS 794
F +
Sbjct: 252 FETFT 256
>01_01_0688 -
5267781-5267814,5269851-5270153,5270605-5270870,
5273319-5273785,5273877-5274501
Length = 564
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 609 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVR 764
LE +++ G +V CSK++ DLF AV G G +T I + PA R
Sbjct: 202 LELDVITGVGEMVTCSKEKAPDLFDAVLGGLGQFGVITRARIPLAPAPARAR 253
>10_08_0414 +
17755427-17756000,17756181-17756308,17756434-17756694,
17756774-17757036,17758662-17759019
Length = 527
Score = 35.9 bits (79), Expect = 0.038
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 609 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLT--SVVIKVIP-AXKYVRIHYYP 779
L+ E+V G +V CS ++A+LF AV G G +T ++++ P K+VR Y
Sbjct: 185 LQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQFGIITRARILLQEAPQKVKWVRAFYDD 244
Query: 780 F 782
F
Sbjct: 245 F 245
>08_02_0917 -
22609543-22609852,22609925-22610266,22610596-22610858,
22611318-22612349
Length = 648
Score = 35.5 bits (78), Expect = 0.051
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 612 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYV 761
+ E+V DG CS+ + DLF+AV G G +T I + PA + V
Sbjct: 173 QLEVVTGDGECHVCSRSADPDLFFAVLGGLGQFGVITRARIPLSPAPQTV 222
>04_04_0106 +
22823781-22823878,22824887-22825325,22825578-22825729,
22825828-22825999
Length = 286
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 135 YRWVIVILALLPMSAAWKLWSIIRNYVVFK 224
+RW I +ALL SA W LW I+++ + K
Sbjct: 102 HRWAIGSVALLGGSACWSLWFILQSRIAKK 131
>04_03_0930 -
20891334-20891511,20891958-20892109,20892737-20893169,
20893592-20893708,20894099-20894196
Length = 325
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 135 YRWVIVILALLPMSAAWKLWSIIRNYVVFK 224
+RW I +ALL SA W LW I+++ + K
Sbjct: 139 HRWAIGSVALLGGSACWSLWFILQSRIARK 168
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 277 CL*TSLTLSSCIFGALFILNTT*FLIIDHNFHAADIGNRANITITHRYSTTRYSKNVS 104
C S T IFGAL ++ + L+I +NF + NR R + RY++ +
Sbjct: 254 CPPNSATQDITIFGALLVVASCLVLLIIYNFSGQILTNREKKQAKSREAAARYARETA 311
>05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330
Length = 564
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 577 DVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS*PI 461
D V +PVP+ P + N G + P G+ + D P+
Sbjct: 431 DSVVSPVPVEPSPNTNQGNCGAVAHSHPGGSIIHDRYPV 469
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 663 ENADLFYAVPWSYGTLGFLTSVVIKVIPAXKYVRIHYY 776
++ D + PW++G L V + ++ A +V I YY
Sbjct: 348 KHRDFLFFPPWTFGVANILIKVPVSLVEATVWVVITYY 385
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +3
Query: 618 ELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSV 728
EL+++D +V+N S+ + + F+++P S + G +T +
Sbjct: 237 ELIVSDHAVINNSQSDEVESFHSIPCSDLSAGSITEL 273
>05_03_0084 +
8266564-8266699,8267497-8267685,8267772-8267911,
8268130-8268225,8268327-8268388,8268559-8268634,
8268709-8268785,8268866-8268899,8268983-8269132,
8269222-8269356,8269450-8269533
Length = 392
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 445 QRTVIFSLSTSKTSTRLICMLVNVL-LYMLCRKDIVCHVGRAVQR*VDLSPDNHSFICL* 269
+ +V+ L T+ C L L +C + V H+ +LS +S IC
Sbjct: 238 EASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYV 297
Query: 268 TSLTLSSCIFGALFILNTT 212
SL +S IF A FIL T
Sbjct: 298 PSLIAASSIFLAKFILKPT 316
>04_01_0501 -
6558120-6559312,6559441-6559518,6559818-6559877,
6560000-6560083,6560407-6560566
Length = 524
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 366 YKRTFTNIQINLVDVLEVDKENMTVRCEPLVTMGQLSR 479
Y+R F+ I + + LE D + VRC P V +G SR
Sbjct: 272 YRRIFSQISRHDIVDLEKDDDRGVVRCYPHVVVGYGSR 309
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 586 WTCDVVSTPVPITRPPTVSWSNSGTTGSAKPS 491
W + P P+ R P+ SWS++ S +PS
Sbjct: 299 WASQPSAAPSPVIRTPSASWSSAICLPSPQPS 330
>12_02_0071 + 13207111-13207280,13208100-13208251,13208728-13208903
Length = 165
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 556 GPAWRQHRTSTGFFSMCAWSTSWFSPTALSLTVVRTKTLIYFTLFRGL 699
G WR S G ++ W +WFSP L+ L T+F+G+
Sbjct: 40 GGRWRHD--SGGLRALSPWRWTWFSPETLAKRRYLGSALRRVTVFKGV 85
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 646 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVS 530
TT P+A T + T +P + +TP P PPT S
Sbjct: 53 TTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKS 91
>06_03_1508 -
30653967-30654245,30654342-30654631,30654773-30654841,
30654854-30654921,30655016-30655492,30655578-30655874,
30655974-30656824,30656917-30656990,30657270-30657292,
30657709-30657772,30658098-30658370,30658511-30658587,
30658686-30658912
Length = 1022
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -1
Query: 289 HSFICL*TSLTLSSCIFGALFILNTT*FLIIDHNFHAADIGNRANITITHRYSTTRYSKN 110
H C S+ IFGAL + + L+I +NF + NR R + R++K
Sbjct: 225 HKGSCKPNSVNQDITIFGALLVGALSLVLLIIYNFSGQLLTNREKKQAKSREAAARHAKE 284
Query: 109 VSVS 98
+++
Sbjct: 285 TAMA 288
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +3
Query: 591 LFQHVCLEYELVLADGSVVNCSKDENADL 677
LF+ +C E +++ + S++ CS++E++ L
Sbjct: 835 LFKDLCAEIDMIQSRSSMIRCSEEEDSRL 863
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,669,188
Number of Sequences: 37544
Number of extensions: 490322
Number of successful extensions: 1419
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -