Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_M14
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 437 e-123
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 437 e-123
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 436 e-123
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 436 e-123
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 436 e-123
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 436 e-123
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 436 e-123
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 436 e-123
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 425 e-119
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 421 e-118
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 366 e-102
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 268 3e-72
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 236 1e-62
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 170 8e-43
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 159 1e-39
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 159 1e-39
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 159 1e-39
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 154 7e-38
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 121 6e-28
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 67 1e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.64
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.64
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.64
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 30 2.0
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 2.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 437 bits (1076), Expect = e-123
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 437 bits (1076), Expect = e-123
Identities = 205/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 436 bits (1075), Expect = e-123
Identities = 204/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 436 bits (1075), Expect = e-123
Identities = 204/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 436 bits (1075), Expect = e-123
Identities = 204/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 436 bits (1075), Expect = e-123
Identities = 204/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 436 bits (1075), Expect = e-123
Identities = 204/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 436 bits (1075), Expect = e-123
Identities = 204/210 (97%), Positives = 208/210 (99%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PA
Sbjct: 73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 133 MYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
ILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 193 ILTERGYSFTTTAEREIVRDIKEKLCYVAL 222
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 425 bits (1048), Expect = e-119
Identities = 197/209 (94%), Positives = 205/209 (98%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 12 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 71
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
EHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+PA
Sbjct: 72 EHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPA 131
Query: 465 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 644
MYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MK
Sbjct: 132 MYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMK 191
Query: 645 ILTERGYSFTTTAEREIVRDIKEKLXYVA 731
ILTERGY+FTTTAEREIVRDIKEKL YVA
Sbjct: 192 ILTERGYTFTTTAEREIVRDIKEKLCYVA 220
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 421 bits (1036), Expect = e-118
Identities = 197/204 (96%), Positives = 202/204 (99%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 302
+AGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 303 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 482
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 483 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 662
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 663 YSFTTTAEREIVRDIKEKLXYVAL 734
YSFTTTAEREIVRDIKEKL YVAL
Sbjct: 185 YSFTTTAEREIVRDIKEKLCYVAL 208
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 366 bits (901), Expect = e-102
Identities = 172/178 (96%), Positives = 176/178 (98%)
Frame = +3
Query: 201 MVVMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 380
MV MGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 381 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 560
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 561 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 178
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 268 bits (657), Expect = 3e-72
Identities = 120/211 (56%), Positives = 161/211 (76%), Gaps = 1/211 (0%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSG+ KAGFAG+ P+ F + VGRP++ VM D ++G +A+S RG+ +++YP+
Sbjct: 15 NGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPM 74
Query: 285 EHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 461
EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FETFN P
Sbjct: 75 EHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVP 134
Query: 462 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 641
A+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL
Sbjct: 135 ALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLR 194
Query: 642 KILTERGYSFTTTAEREIVRDIKEKLXYVAL 734
+L GY F + E EIVR++KE Y+AL
Sbjct: 195 VLLRREGYEFHRSNEFEIVREMKENACYLAL 225
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 236 bits (578), Expect = 1e-62
Identities = 111/212 (52%), Positives = 151/212 (71%), Gaps = 3/212 (1%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVV--MGQKDSYVGDEAQSKRGILTLKY 278
NG+G K G+AG + P +FPS+VGRP + V + KD VG+E R +L + Y
Sbjct: 13 NGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINY 72
Query: 279 PIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 455
P+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE +
Sbjct: 73 PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYG 132
Query: 456 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 635
++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T Y
Sbjct: 133 FNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKY 192
Query: 636 LMKILTERGYSFTTTAEREIVRDIKEKLXYVA 731
L+K+L +RGY+F +A+ E VR +KEKL Y+A
Sbjct: 193 LIKLLLQRGYNFNHSADFETVRQMKEKLCYIA 224
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 170 bits (414), Expect = 8e-43
Identities = 91/229 (39%), Positives = 130/229 (56%), Gaps = 21/229 (9%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVVMGQKDSYVGDEAQ 248
NG+G K G+AG+ P+ + PS V Q V + D ++GDEA
Sbjct: 13 NGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEAL 72
Query: 249 SKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 425
S T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE
Sbjct: 73 SPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREY 132
Query: 426 MTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 581
+IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY
Sbjct: 133 TAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYV 192
Query: 582 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLXYV 728
+ I + +AGRD+T ++ +L +R ++ E+ + IKEK YV
Sbjct: 193 IGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYV 241
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 159 bits (387), Expect = 1e-39
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKI 326
EHGI+TNWDDMEKI
Sbjct: 73 EHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 159 bits (387), Expect = 1e-39
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKI 326
EHGI+TNWDDMEKI
Sbjct: 73 EHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 159 bits (387), Expect = 1e-39
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDMEKI 326
EHGI+TNWDDMEKI
Sbjct: 73 EHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 154 bits (373), Expect = 7e-38
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQSKRGILTLKYPI
Sbjct: 13 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
Query: 285 EHGIITNWDDM 317
EHGI+TNWDDM
Sbjct: 73 EHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 121 bits (291), Expect = 6e-28
Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 17/201 (8%)
Frame = +3
Query: 108 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEA--QSKR------GI 263
GS + GFAG++ P+ PS + + Q+ GD + Q+KR G
Sbjct: 19 GSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKREKNFFIGT 78
Query: 264 LTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 416
+ P ++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A
Sbjct: 79 TKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRAR 138
Query: 417 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 596
REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+
Sbjct: 139 REKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAV 198
Query: 597 LRLDLAGRDLTDYLMKILTER 659
++ + G +T+ L ++L ++
Sbjct: 199 VKCPIGGDLITEQLAQMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 67.3 bits (157), Expect = 1e-11
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NG K G ++PR V SIV + +H+ V + + +E K + ++ PI
Sbjct: 10 NGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-PI 63
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
E G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 64 ERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTE 122
Query: 465 MYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 632
++ + L S + +V+DSG + G + +++R+D+ G+ LT+
Sbjct: 123 VHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTN 182
Query: 633 YLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 731
L ++ R + E ++ + KE L +V+
Sbjct: 183 KLKDWVSYR--QLNVSEETYVINECKEDLCFVS 213
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 67.3 bits (157), Expect = 1e-11
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Frame = +3
Query: 105 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQKDSYVGDEAQSKRGILTLKYPI 284
NG K G ++PR V SIV + +H+ V + + +E K + ++ PI
Sbjct: 10 NGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSLFYVR-PI 63
Query: 285 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPA 464
E G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 64 ERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTE 122
Query: 465 MYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 632
++ + L S + +V+DSG + G + +++R+D+ G+ LT+
Sbjct: 123 VHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTN 182
Query: 633 YLMKILTERGYSFTTTAEREIVRDIKEKLXYVA 731
L ++ R + E ++ + KE L +V+
Sbjct: 183 KLKDWVSYR--QLNVSEETYVINECKEDLCFVS 213
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +3
Query: 348 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 527
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 528 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 698
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 699 RDIKEKLXYV 728
R E+ YV
Sbjct: 385 RFALEQTTYV 394
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 547 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 452
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRP 171
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.64
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 234 GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 413
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 414 NREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 566
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 692 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 558
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 214 PITTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 104
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 91 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 198
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 123 KAGFAGDDAPRAVFPSIVGRPRHQG 197
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 100 STMAPACARPVSPATTRPAPSSRPSWVALATRA 198
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,657,551
Number of Sequences: 27780
Number of extensions: 301827
Number of successful extensions: 1316
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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