Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M11
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 153 NYSAKGLRTFITFYPRCH 206
           NYS K +R+   FY  C+
Sbjct: 5   NYSKKDIRSLSFFYKICN 22


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 153 NYSAKGLRTFITFYPRCH 206
           NYS K +R+   FY  C+
Sbjct: 5   NYSKKDIRSLSFFYKICN 22


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 120 WSTITTLSTTPNYSAKGL 173
           WS      +TP Y  +GL
Sbjct: 178 WSATPQAGSTPTYQTQGL 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,016
Number of Sequences: 336
Number of extensions: 2025
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)