Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M11
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.99 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   1.7  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   1.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +2

Query: 161 RKRVENLHYVLPQVPSTIGKSIQGILAYDKTHTTASANITQGGIGFTFVNLRMKSERG 334
           RK++  L   +   P+ +  + +  +    T T     ITQ G G  F+ ++   ERG
Sbjct: 463 RKQISELESNMQISPNELKPNDKSQVIKQNTWTVFRDAITQTGTGPAFLTIKEWIERG 520


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 412 LICLLNIY*LLKQYLNVDVDIVIKLV 335
           + CLL  + L+    NVD DI++ L+
Sbjct: 74  MYCLLEAFSLVDDEANVDEDIMLGLL 99


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 412 LICLLNIY*LLKQYLNVDVDIVIKLV 335
           + CLL  + L+    NVD DI++ L+
Sbjct: 74  MYCLLEAFSLVDDEANVDEDIMLGLL 99


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
 Frame = +2

Query: 122 VYHHNAKYDAKLFRKRVENLHYVLPQVPSTIG-------KSIQGILAYDKTHTTASANIT 280
           VY   A +D  + R +   L  +L  VP+          KS+Q I  YD+ +    A I 
Sbjct: 95  VYGTLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIV 154

Query: 281 QG 286
            G
Sbjct: 155 NG 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,800
Number of Sequences: 438
Number of extensions: 2303
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)