Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M08
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.21 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 222 YFLKHLCY*FNKNILKNIMILLFISFEI 305
           Y+L H+C   +  ++ NI+ L+   FEI
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLMHRRFEI 293


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 228 LKHLCY*FNKNILKNIMILLFISFEILI 311
           LKH+     KN+  N ++ +F S  I+I
Sbjct: 72  LKHIFNILMKNVTLNDVVFIFCSAPIII 99


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 418 RGTNHESVFLFDIFFILSL 474
           R  ++ SVFLFDI  I++L
Sbjct: 68  RSYSNFSVFLFDIITIVTL 86


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 191 CMERQHSHR 165
           CME QH HR
Sbjct: 156 CMEYQHLHR 164


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 191 CMERQHSHR 165
           CME QH HR
Sbjct: 156 CMEYQHLHR 164


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 191 CMERQHSHR 165
           CME QH HR
Sbjct: 156 CMEYQHLHR 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,491
Number of Sequences: 336
Number of extensions: 1960
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)