Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M08
         (493 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    28   3.2  
U41007-18|AAA82262.2|  295|Caenorhabditis elegans Hypothetical p...    28   3.2  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    28   4.2  
AF067607-2|AAF98611.1|  109|Caenorhabditis elegans Hypothetical ...    28   4.2  
U97189-2|AAC48165.2|  336|Caenorhabditis elegans Serpentine rece...    27   9.8  

>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 280 FYCLYHLKY*LIIFVDYFRFTKRLCF 357
           FYC+Y ++  +++ ++ +  T  LCF
Sbjct: 55  FYCIYFIQLRVMMIMEIYNITNNLCF 80


>U41007-18|AAA82262.2|  295|Caenorhabditis elegans Hypothetical
           protein C33H5.1 protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 252 NKNILKNI-MILLFISFEILINNFRGLLSIYKTPLFLSVFFFSCQLP 389
           N+N+ KNI ++++ IS  +LI NF       + PLF +  F+ C  P
Sbjct: 4   NRNLTKNIVLVMILISSLLLIINFLSDRYEERRPLFDA--FYECAYP 48


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 191  CMERQHSHRTIHRPGDCIRDNRRSLDTYIRNCCSRNQXRAVE 66
            C E   S+  +HR   C+ D+ R +D    + C R Q  A E
Sbjct: 1030 CSETCGSNGKMHRKSYCVDDSNRRVD---ESLCGREQKEATE 1068


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 191  CMERQHSHRTIHRPGDCIRDNRRSLDTYIRNCCSRNQXRAVE 66
            C E   S+  +HR   C+ D+ R +D    + C R Q  A E
Sbjct: 1030 CSETCGSNGKMHRKSYCVDDSNRRVD---ESLCGREQKEATE 1068


>AF067607-2|AAF98611.1|  109|Caenorhabditis elegans Hypothetical
           protein C18H7.5 protein.
          Length = 109

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +2

Query: 338 LQNAFVFE-CFFFLMSTTIL*MFADKIQEVRIMNRFSYLIF--FLF*V*NKLY 487
           LQN   F+ CF       ++   + K Q ++I+ RF+ + F  F F   NKLY
Sbjct: 49  LQNLAGFKFCFQIAQQILVIYRVSQKCQNMKILKRFNKIDFQKFFFDFPNKLY 101


>U97189-2|AAC48165.2|  336|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 15 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 273 IMILLFISFEILINNFRGLLSIYKTPLFLSVFFFSCQLPFCECLQI 410
           I ++ F+ F++   +F G L    +  F+SVF FS         +I
Sbjct: 36  IPLIYFVIFKLPKTSFHGNLKFLFSAYFVSVFLFSVDFAIISTTEI 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,063,715
Number of Sequences: 27780
Number of extensions: 165621
Number of successful extensions: 319
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)