Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_M02
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0098 - 12844631-12845074,12845329-12846570 135 4e-32
02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785 43 3e-04
05_04_0094 + 17888998-17889589,17889668-17889795,17889879-178901... 40 0.003
02_02_0092 + 6686658-6687246,6687343-6687749,6687875-6688378,668... 40 0.003
01_07_0131 + 41292800-41293400,41293522-41293649,41293759-412940... 40 0.003
01_06_0894 - 32781957-32782287,32783019-32783284,32783771-327840... 38 0.009
01_01_0688 - 5267781-5267814,5269851-5270153,5270605-5270870,527... 36 0.027
01_01_0624 - 4696314-4696608,4696704-4697394,4699525-4699540,469... 36 0.027
06_03_0532 - 21844213-21844252,21844579-21844836,21845303-218455... 35 0.082
08_02_0917 - 22609543-22609852,22609925-22610266,22610596-226108... 34 0.11
04_04_0548 + 26172595-26173189,26173346-26173473,26173606-261738... 34 0.14
10_08_0414 + 17755427-17756000,17756181-17756308,17756434-177566... 33 0.25
04_04_0106 + 22823781-22823878,22824887-22825325,22825578-228257... 31 0.77
04_03_0930 - 20891334-20891511,20891958-20892109,20892737-208931... 31 0.77
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 30 1.8
05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330 30 1.8
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 29 5.4
05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826... 29 5.4
04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656... 29 5.4
02_01_0384 - 2781362-2782299,2782320-2782428 29 5.4
12_02_0071 + 13207111-13207280,13208100-13208251,13208728-13208903 28 7.1
07_03_1107 - 24024387-24024497,24025799-24026410 28 7.1
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548... 28 7.1
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 28 7.1
10_08_0050 + 14469879-14470072,14470620-14471094 28 9.4
04_04_0588 - 26412487-26413887 28 9.4
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 28 9.4
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 135 bits (326), Expect = 4e-32
Identities = 82/221 (37%), Positives = 122/221 (55%), Gaps = 7/221 (3%)
Frame = +3
Query: 123 ETFLEYLVVEYRWVIVILALLPMSAAWKLWSIIRNYVVFKMNSAP---KMHDDKVKEVQR 293
+ ++YLV ++RW++VI +LP+SA ++I V M S K HDD V++V +
Sbjct: 15 KVLVDYLV-KFRWILVIFVVLPISALI-YFNIYLGDVWSAMKSEKRRQKEHDDNVQKVVK 72
Query: 294 QIKEWLSGDKSTHLCTARPTWQTMSFRHSMYKRTFTNIQINLV---DVLEVDKENMTVRC 464
++K+ + K +CTAR W + R+ YKR + +++L ++LE+D+E M +
Sbjct: 73 RLKQ-RNPKKDGLVCTARKPWIAVGMRNVDYKRA-RHFEVDLSAFRNILEIDRERMVAKV 130
Query: 465 EPLVTMGQLSRTXXXXXXXXXXXXXXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELV 644
EPLV MGQ++R D L SH++GLF + E+V
Sbjct: 131 EPLVNMGQITRATCPMNLALAVVAELDDLTVGGLINGYGIEGSSHLYGLFSDTVVAVEVV 190
Query: 645 LADGSVVNCSKD-ENADLFYAVPWSYGTLGFLTSXVIKVIP 764
LADG VV +KD E +DLFY +PWS GTLGFL S IK+IP
Sbjct: 191 LADGRVVRATKDNEYSDLFYGIPWSQGTLGFLVSAEIKLIP 231
>02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785
Length = 524
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 627 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
LE +++ G +V CS+D+++DLF+AV G G +T I ++PA
Sbjct: 187 LELDVITGTGDMVTCSRDKDSDLFFAVLGGLGQFGIITRARIGLMPA 233
>05_04_0094 +
17888998-17889589,17889668-17889795,17889879-17890139,
17890241-17890503,17890588-17890909
Length = 521
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 630 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
E E+V G V+ CS ++N+DLF+A G G +T I + PA
Sbjct: 192 ELEIVTGRGDVITCSPEQNSDLFHAALGGLGQFGVITRARIPLEPA 237
>02_02_0092 +
6686658-6687246,6687343-6687749,6687875-6688378,
6688935-6688940
Length = 501
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 627 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
LE +++ G +V CS+D+ DLF+AV G G +T I + PA
Sbjct: 190 LELDVITGRGDMVTCSRDKEPDLFFAVLGGLGQFGIITRARIGLEPA 236
>01_07_0131 +
41292800-41293400,41293522-41293649,41293759-41294019,
41294154-41294416,41294507-41294831
Length = 525
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 630 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
+ E+V G VV CS + N+DLFYA G G +T I + PA
Sbjct: 195 QLEIVTGRGEVVTCSHEVNSDLFYAALGGLGQFGIITRARIALEPA 240
>01_06_0894 -
32781957-32782287,32783019-32783284,32783771-32784040,
32785007-32785134,32785284-32785893
Length = 534
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 630 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
E ++V G VV CS+ N DLF+ G LG +T I + PA
Sbjct: 198 ELDVVTGKGEVVTCSESNNPDLFFGALGGLGQLGIITRARIALEPA 243
>01_01_0688 -
5267781-5267814,5269851-5270153,5270605-5270870,
5273319-5273785,5273877-5274501
Length = 564
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 627 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
LE +++ G +V CSK++ DLF AV G G +T I + PA
Sbjct: 202 LELDVITGVGEMVTCSKEKAPDLFDAVLGGLGQFGVITRARIPLAPA 248
>01_01_0624 -
4696314-4696608,4696704-4697394,4699525-4699540,
4699577-4699630,4699741-4699809
Length = 374
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 612 FQHVCLEYELVLAD-GSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
F+H+ L ++ + G V CSK N+DLF AV G G +T + V PA
Sbjct: 34 FEHIFLPQDMSQSGHGETVTCSKAVNSDLFDAVLGGLGQFGVITRARVAVEPA 86
>06_03_0532 -
21844213-21844252,21844579-21844836,21845303-21845568,
21845963-21846369,21846528-21847143
Length = 528
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 630 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
E ++V G ++ CS + N+ LF+AV G G +T I++ PA
Sbjct: 200 ELDVVTGMGEMITCSPEVNSALFFAVLGGLGQFGVITRARIRLEPA 245
>08_02_0917 -
22609543-22609852,22609925-22610266,22610596-22610858,
22611318-22612349
Length = 648
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 630 EYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 767
+ E+V DG CS+ + DLF+AV G G +T I + PA
Sbjct: 173 QLEVVTGDGECHVCSRSADPDLFFAVLGGLGQFGVITRARIPLSPA 218
>04_04_0548 +
26172595-26173189,26173346-26173473,26173606-26173866,
26173988-26174250,26176748-26177099
Length = 532
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 627 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLT 740
L+ E+V G VV CS E +LF+AV G G +T
Sbjct: 192 LQLEVVTGKGEVVTCSPTEIPELFFAVLGGLGQFGIIT 229
>10_08_0414 +
17755427-17756000,17756181-17756308,17756434-17756694,
17756774-17757036,17758662-17759019
Length = 527
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 627 LEYELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLT 740
L+ E+V G +V CS ++A+LF AV G G +T
Sbjct: 185 LQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQFGIIT 222
>04_04_0106 +
22823781-22823878,22824887-22825325,22825578-22825729,
22825828-22825999
Length = 286
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 153 YRWVIVILALLPMSAAWKLWSIIRNYVVFK 242
+RW I +ALL SA W LW I+++ + K
Sbjct: 102 HRWAIGSVALLGGSACWSLWFILQSRIAKK 131
>04_03_0930 -
20891334-20891511,20891958-20892109,20892737-20893169,
20893592-20893708,20894099-20894196
Length = 325
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 153 YRWVIVILALLPMSAAWKLWSIIRNYVVFK 242
+RW I +ALL SA W LW I+++ + K
Sbjct: 139 HRWAIGSVALLGGSACWSLWFILQSRIARK 168
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -1
Query: 295 CL*TSLTLSSCIFGALFILNTT*FLIIDHNFHAADIGNRANITITHRYSTTRYSKNVS 122
C S T IFGAL ++ + L+I +NF + NR R + RY++ +
Sbjct: 254 CPPNSATQDITIFGALLVVASCLVLLIIYNFSGQILTNREKKQAKSREAAARYARETA 311
>05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330
Length = 564
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 595 DVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS*PI 479
D V +PVP+ P + N G + P G+ + D P+
Sbjct: 431 DSVVSPVPVEPSPNTNQGNCGAVAHSHPGGSIIHDRYPV 469
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 636 ELVLADGSVVNCSKDENADLFYAVPWSYGTLGFLT 740
EL+++D +V+N S+ + + F+++P S + G +T
Sbjct: 237 ELIVSDHAVINNSQSDEVESFHSIPCSDLSAGSIT 271
>05_03_0084 +
8266564-8266699,8267497-8267685,8267772-8267911,
8268130-8268225,8268327-8268388,8268559-8268634,
8268709-8268785,8268866-8268899,8268983-8269132,
8269222-8269356,8269450-8269533
Length = 392
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 463 QRTVIFSLSTSKTSTRLICMLVNVL-LYMLCRKDIVCHVGRAVQR*VDLSPDNHSFICL* 287
+ +V+ L T+ C L L +C + V H+ +LS +S IC
Sbjct: 238 EASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYV 297
Query: 286 TSLTLSSCIFGALFILNTT 230
SL +S IF A FIL T
Sbjct: 298 PSLIAASSIFLAKFILKPT 316
>04_01_0501 -
6558120-6559312,6559441-6559518,6559818-6559877,
6560000-6560083,6560407-6560566
Length = 524
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 384 YKRTFTNIQINLVDVLEVDKENMTVRCEPLVTMGQLSR 497
Y+R F+ I + + LE D + VRC P V +G SR
Sbjct: 272 YRRIFSQISRHDIVDLEKDDDRGVVRCYPHVVVGYGSR 309
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 604 WTCDVVSTPVPITRPPTVSWSNSGTTGSAKPS 509
W + P P+ R P+ SWS++ S +PS
Sbjct: 299 WASQPSAAPSPVIRTPSASWSSAICLPSPQPS 330
>12_02_0071 + 13207111-13207280,13208100-13208251,13208728-13208903
Length = 165
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 574 GPAWRQHRTSTGFFSMCAWSTSWFSPTALSLTVVRTKTLIYFTLFRGL 717
G WR S G ++ W +WFSP L+ L T+F+G+
Sbjct: 40 GGRWRHD--SGGLRALSPWRWTWFSPETLAKRRYLGSALRRVTVFKGV 85
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 664 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVS 548
TT P+A T + T +P + +TP P PPT S
Sbjct: 53 TTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKS 91
>06_03_1508 -
30653967-30654245,30654342-30654631,30654773-30654841,
30654854-30654921,30655016-30655492,30655578-30655874,
30655974-30656824,30656917-30656990,30657270-30657292,
30657709-30657772,30658098-30658370,30658511-30658587,
30658686-30658912
Length = 1022
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = -1
Query: 307 HSFICL*TSLTLSSCIFGALFILNTT*FLIIDHNFHAADIGNRANITITHRYSTTRYSKN 128
H C S+ IFGAL + + L+I +NF + NR R + R++K
Sbjct: 225 HKGSCKPNSVNQDITIFGALLVGALSLVLLIIYNFSGQLLTNREKKQAKSREAAARHAKE 284
Query: 127 VSVS 116
+++
Sbjct: 285 TAMA 288
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +3
Query: 609 LFQHVCLEYELVLADGSVVNCSKDENADL 695
LF+ +C E +++ + S++ CS++E++ L
Sbjct: 835 LFKDLCAEIDMIQSRSSMIRCSEEEDSRL 863
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 428 LGGGQREYDSPLRASSDDGSAVP---HIGAARLGAARCS 535
LGGG+ E P +S DG V +G RL RCS
Sbjct: 133 LGGGELENAGPAHSSGRDGGEVEGLIEMGRLRLPPRRCS 171
>04_04_0588 - 26412487-26413887
Length = 466
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 177 PILLSPIDIPLRGTPKTFLFLW 112
P+ S D+P +GTP+T F+W
Sbjct: 442 PVTSSSSDLPPQGTPQTPTFMW 463
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 91 ESNSSESARNTIFLTTCLSLHCY 23
+ +S +S+R+T F ++CL L CY
Sbjct: 530 KDHSKDSSRDTAFPSSCLLLQCY 552
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,829,219
Number of Sequences: 37544
Number of extensions: 473593
Number of successful extensions: 1376
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -