Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_M02
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 164 7e-41
AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical ... 116 2e-26
AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine re... 33 0.30
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 0.68
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 2.1
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 2.1
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 29 2.8
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical p... 29 3.6
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 29 3.6
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 29 4.8
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.4
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 164 bits (398), Expect = 7e-41
Identities = 89/232 (38%), Positives = 125/232 (53%), Gaps = 10/232 (4%)
Frame = +3
Query: 99 KNKMAIETETFLEYLVVEYRWVIVILALLPMSAAWKLWSIIRNYVVFKMNSAPKMHDDKV 278
K++ E +E+++ +RWV V+ LLP+S + RN +V +NSAP H KV
Sbjct: 7 KDEKPTRWEKCVEFIMFHFRWVFVVPFLLPLSFLFNTVFDFRNRIVHAVNSAPNAHVRKV 66
Query: 279 KEVQRQIKEWLSGDKSTHLCTARPTWQTMSFRHSMYKRTFTNIQIN-LVDVLEVDKENMT 455
K +Q Q+KEW + + L ARP W TMSFR +YK T I + L D+L++D E MT
Sbjct: 67 KHIQEQLKEWNDNGRKSKLVNARPGWLTMSFRFPLYKENATKIATDKLFDILDLDVEKMT 126
Query: 456 VRCEPLVTMGQLSRTXXXXXXXXXXXXXXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEY 635
V+ EP VTMGQLS+ D L S +G+FQH+C Y
Sbjct: 127 VKAEPGVTMGQLSQYLISRGYTLPVLPELDDLTVGGLINGCGVESGSFKYGMFQHICTGY 186
Query: 636 ELVLADGSVVN-----CSKDENA----DLFYAVPWSYGTLGFLTSXVIKVIP 764
E+V++DG + N +K E A LF+A+PWS GT+ FL + IK+IP
Sbjct: 187 EVVMSDGELKNVYPDSAAKTEQAKQDNSLFFAIPWSQGTICFLVAATIKIIP 238
>AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical
protein Y7A5A.1 protein.
Length = 538
Score = 116 bits (279), Expect = 2e-26
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 3/205 (1%)
Frame = +3
Query: 156 RWVIVILALLPMSAAWKLWSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEW--LSGDKST 329
R ++++L LP S + L+ R ++ K+ SA H +V+++Q Q+ EW L +
Sbjct: 18 RGLVIVLFCLPASFLFDLFIQFRIWLDRKL-SATTSHQQRVQKIQDQVTEWSKLPDSEQK 76
Query: 330 HLCTARPTWQTMSFRHSMYKRTFTNIQINLVDVLEVDKENMTVRCEPLVTMGQLSRTXXX 509
LCTARP W ++S KR + I+L DVL +D++N+TV EP +T+ ++ +
Sbjct: 77 PLCTARPNWLSLSTTF-FDKRKCHQVPIDLHDVLSLDEKNLTVTVEPNITVREICKFLIP 135
Query: 510 XXXXXXXXXXXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELVLADGSVVNCS-KDEN 686
SH GL+Q + YE+V ADG+V+ + +E+
Sbjct: 136 KGYTLAVTLEIGDATLGGLAFGVGMTTYSHKVGLYQEAIVSYEVVTADGNVITVTDSNEH 195
Query: 687 ADLFYAVPWSYGTLGFLTSXVIKVI 761
+DLFY +PWS+GTLGFL ++++
Sbjct: 196 SDLFYCLPWSHGTLGFLVGLTLRIV 220
>AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine
receptor, class t protein70 protein.
Length = 323
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = -1
Query: 184 NRANITITHRYSTTRYSKNVSVSMAILFFNVESNSSESARNTIFLTTCLSLHCY 23
N I + + TT + + V LF + ES RN L CL +HCY
Sbjct: 212 NEIAILVQSTFVTTYITAMIFVWHQSLFSKISFIDMESKRNQAILNCCLIIHCY 265
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = -1
Query: 664 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS* 485
TT+P+ T++ + T + T +TP T PT + + S TT + + +
Sbjct: 259 TTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Query: 484 PIVTRGSQRTVIFSLSTSKTSTR 416
P T + T F +T T+T+
Sbjct: 319 PTTTT-TASTTTFKTTTITTTTQ 340
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 0.68
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = -1
Query: 706 TA*NRSAFSSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTT 527
T + + SS LTTE R SS + T +P T + P+ + TVS T
Sbjct: 289 TTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRT 348
Query: 526 GSAKPSGANVRDS*PIVTRGSQRTVIFSLSTSKTSTR 416
KPS + + + S + + S+S T+++
Sbjct: 349 SEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQ 385
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 351 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 443
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 351 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 443
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 351 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 443
TW T H+MY+ F+NI + D L V K
Sbjct: 554 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 584
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 29.5 bits (63), Expect = 2.8
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = -1
Query: 682 SSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTG-SAKPSG 506
SS Q TT PS T+ T +P T +TP T + + + GTT A PS
Sbjct: 144 SSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPTTSTTTTARGTTDIPAPPSV 203
Query: 505 ANVRDS*PIVTRGSQRTVIF--SLSTSKTSTRLICMLVNVLLYMLCRKDIVCHVGR 344
+ +Q T+ F + + + +C+ +N + L +D+ + G+
Sbjct: 204 VEKWCMKKLQKNNAQFTIDFIEEAESDEGTNAELCIYLNRAGFKLRLEDLTEYCGK 259
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 210 WSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEWLSGDKS 326
W++ RNY++ + + P + DD+++ + K+W + +KS
Sbjct: 351 WALWRNYLIHRFSLDPLISDDRLR---TECKKWQTEEKS 386
>Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical
protein F32D8.12c protein.
Length = 383
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +3
Query: 603 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSXVIKV 758
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 75 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 134
Query: 759 IP 764
P
Sbjct: 135 HP 136
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +3
Query: 603 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSXVIKV 758
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 152 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 211
Query: 759 IP 764
P
Sbjct: 212 HP 213
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +3
Query: 603 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSXVIKV 758
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 166 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 225
Query: 759 IP 764
P
Sbjct: 226 HP 227
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 293 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 424
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 137 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 180
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 293 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 424
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 179 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 222
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical protein
T04G9.1 protein.
Length = 1610
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +3
Query: 30 WSDKHVVRNIVLRADSEEFDSTLK--NKMAIETETFLEYLV-VEYRWVIVILALLPMSAA 200
W ++ +V N A S+ DS + N + + + + ++ + + LA L +
Sbjct: 968 WHER-IVNNCAKDAASDMVDSKINEINSVIAYVDPMINGVTDLDVKEELSDLAFLIRTMY 1026
Query: 201 WKLWSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEWLS 314
L S ++N+V + S PK + K+K +++++ +W S
Sbjct: 1027 DNLDSKLQNHVRYGQVSLPKTFELKLKSIEQRLGQWTS 1064
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 293 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 424
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 179 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 222
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 664 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGS 521
TTEP+ TS+ ++ T P + +ST T PT + + + TT S
Sbjct: 275 TTEPTTTTSTTTQTTT-TVPTSTSTISTTSTTTTTPTTTTTTTSTTTS 321
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = -1
Query: 667 LTTEPSARTSSYSRHTC*--KSPWTCDVVSTPVPITRPPTVSWSNSGT----TGSAKPSG 506
+T+ P R S +++H K P T +TPVP P T S + S T T S+ +
Sbjct: 411 VTSPPVIRPSYWTKHRVKSTKEPKTTIFTTTPVPC--PTTTSTTTSATTLVPTTSSSTTT 468
Query: 505 ANVRDS*PIVTRGSQRTVIFSLSTSKTST 419
P+ + ++ T +++ TST
Sbjct: 469 TTTTTPVPVTSTTTEPTTTTYTTSTSTST 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,359,064
Number of Sequences: 27780
Number of extensions: 404481
Number of successful extensions: 1204
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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