Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_L18
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    27   0.90 
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   2.8  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   8.4  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 618 GSCKLPVQASFSLVVSNDHRYSCEDCGNW--HARCRA 514
           G CKLP +   +++ + D  +SC  C N   + RCR+
Sbjct: 42  GCCKLPPELIDAVLSNVDLHWSCIGCTNMLKNPRCRS 78


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 277 QLTRPSSASAGGIGTIPSSAASCVRGRS 360
           +L +P++A AGG GT+   +   VR ++
Sbjct: 284 ELVKPTAALAGGSGTVGGRSKRSVRRKA 311


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 104 VCAKTRVKLALSSIGSKTCVVSALFDALRSH 196
           V A   V   +  I  K C + ALF+A+R H
Sbjct: 321 VQAGRSVSRVIPRIYEKNCPLLALFEAVRPH 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,664
Number of Sequences: 2352
Number of extensions: 13197
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)