Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_L18
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homol... 31 3.7
Y11072-1|CAA71955.1| 685|Homo sapiens synaptopodin protein. 30 8.6
BC146665-1|AAI46666.1| 685|Homo sapiens synaptopodin protein. 30 8.6
BC142683-1|AAI42684.1| 685|Homo sapiens SYNPO protein protein. 30 8.6
BC126422-1|AAI26423.1| 432|Homo sapiens ring finger protein 135... 30 8.6
BC126420-1|AAI26421.1| 432|Homo sapiens ring finger protein 135... 30 8.6
BC005084-1|AAH05084.1| 210|Homo sapiens ring finger protein 135... 30 8.6
AY598332-1|AAT06743.1| 432|Homo sapiens L13 protein. 30 8.6
AJ496729-1|CAD43140.1| 432|Homo sapiens hypothetical protein pr... 30 8.6
AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein. 30 8.6
AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein. 30 8.6
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein. 30 8.6
>AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homolog
variant protein.
Length = 526
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = -2
Query: 249 GPRRPRSFPLYTSSPRRRWERRASKSAD-TTHVF-EPIEDSASLTRVL 112
GPRRPR P ++S RR RRA S + + F E I++ A++TR+L
Sbjct: 57 GPRRPRPLPA-SASVRRAPARRAMDSDEGYNYEFNEVIQNPATITRIL 103
>Y11072-1|CAA71955.1| 685|Homo sapiens synaptopodin protein.
Length = 685
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 331 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 212
S L + + Q T+V+ D MS + TTPT +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227
>BC146665-1|AAI46666.1| 685|Homo sapiens synaptopodin protein.
Length = 685
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 331 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 212
S L + + Q T+V+ D MS + TTPT +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227
>BC142683-1|AAI42684.1| 685|Homo sapiens SYNPO protein protein.
Length = 685
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 331 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 212
S L + + Q T+V+ D MS + TTPT +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227
>BC126422-1|AAI26423.1| 432|Homo sapiens ring finger protein 135
protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = -2
Query: 357 PPSYAACRARRDCSYPSRRGRRWSC*LTAR*VSCARGPRRPRSFPLYTSSPRRRWERRAS 178
P ++ CR + + +R RRW+C T R + + R + + RR R
Sbjct: 35 PCGHSFCRHCLEALWGARDARRWAC-PTCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQ 93
Query: 177 KSADTTHVFEPIEDSASLTRVLAQTARLPRFPALTI 70
+D H P S+SL+ A+ R P + +
Sbjct: 94 AGSDPAHC--PCPGSSSLSSAAARPRRRPELQRVAV 127
>BC126420-1|AAI26421.1| 432|Homo sapiens ring finger protein 135
protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = -2
Query: 357 PPSYAACRARRDCSYPSRRGRRWSC*LTAR*VSCARGPRRPRSFPLYTSSPRRRWERRAS 178
P ++ CR + + +R RRW+C T R + + R + + RR R
Sbjct: 35 PCGHSFCRHCLEALWGARDARRWAC-PTCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQ 93
Query: 177 KSADTTHVFEPIEDSASLTRVLAQTARLPRFPALTI 70
+D H P S+SL+ A+ R P + +
Sbjct: 94 AGSDPAHC--PCPGSSSLSSAAARPRRRPELQRVAV 127
>BC005084-1|AAH05084.1| 210|Homo sapiens ring finger protein 135
protein.
Length = 210
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = -2
Query: 357 PPSYAACRARRDCSYPSRRGRRWSC*LTAR*VSCARGPRRPRSFPLYTSSPRRRWERRAS 178
P ++ CR + + +R RRW+C T R + + R + + RR R
Sbjct: 35 PCGHSFCRHCLEALWGARDARRWAC-PTCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQ 93
Query: 177 KSADTTHVFEPIEDSASLTRVLAQTARLPRFPALTI 70
+D H P S+SL+ A+ R P + +
Sbjct: 94 AGSDPAHC--PCPGSSSLSSAAARPRRRPELQRVAV 127
>AY598332-1|AAT06743.1| 432|Homo sapiens L13 protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = -2
Query: 357 PPSYAACRARRDCSYPSRRGRRWSC*LTAR*VSCARGPRRPRSFPLYTSSPRRRWERRAS 178
P ++ CR + + +R RRW+C T R + + R + + RR R
Sbjct: 35 PCGHSFCRHCLEALWGARDARRWAC-PTCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQ 93
Query: 177 KSADTTHVFEPIEDSASLTRVLAQTARLPRFPALTI 70
+D H P S+SL+ A+ R P + +
Sbjct: 94 AGSDPAHC--PCPGSSSLSSAAARPRRRPELQRVAV 127
>AJ496729-1|CAD43140.1| 432|Homo sapiens hypothetical protein
protein.
Length = 432
Score = 30.3 bits (65), Expect = 8.6
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = -2
Query: 357 PPSYAACRARRDCSYPSRRGRRWSC*LTAR*VSCARGPRRPRSFPLYTSSPRRRWERRAS 178
P ++ CR + + +R RRW+C T R + + R + + RR R
Sbjct: 35 PCGHSFCRHCLEALWGARDARRWAC-PTCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQ 93
Query: 177 KSADTTHVFEPIEDSASLTRVLAQTARLPRFPALTI 70
+D H P S+SL+ A+ R P + +
Sbjct: 94 AGSDPAHC--PCPGSSSLSSAAARPRRRPELQRVAV 127
>AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 331 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 212
S L + + Q T+V+ D MS + TTPT +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227
>AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 331 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 212
S L + + Q T+V+ D MS + TTPT +S +HF
Sbjct: 189 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 227
>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
Length = 1015
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 331 SKGLFLSLPQRQTMVLLTDSTMSELRSRTTPTSQFSSLHF 212
S L + + Q T+V+ D MS + TTPT +S +HF
Sbjct: 301 SSSLLIDI-QPNTLVVSADQEMSGRAAATTPTKVYSEVHF 339
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,170,580
Number of Sequences: 237096
Number of extensions: 1787903
Number of successful extensions: 5925
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5925
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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