Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_L17
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 85 5e-17
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 79 3e-15
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 79 3e-15
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 73 3e-13
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 68 6e-12
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 68 6e-12
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 68 6e-12
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 68 6e-12
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 68 6e-12
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 68 6e-12
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 68 6e-12
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 66 3e-11
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 66 3e-11
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 66 3e-11
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 61 7e-10
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 61 7e-10
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 61 7e-10
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 61 7e-10
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 61 7e-10
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 61 7e-10
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 61 7e-10
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 61 9e-10
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 61 9e-10
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 61 9e-10
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 61 9e-10
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 55 5e-08
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z12017-7|CAH19088.1| 856|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 32 0.38
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 31 0.87
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 30 2.0
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 3.5
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 29 3.5
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 29 3.5
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 29 3.5
AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormo... 29 3.5
AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormo... 29 3.5
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 29 3.5
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 29 3.5
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 4.6
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 4.6
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z74475-5|CAA98959.2| 279|Caenorhabditis elegans Hypothetical pr... 28 8.1
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 28 8.1
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 28 8.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 8.1
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/96 (42%), Positives = 59/96 (61%)
Frame = +2
Query: 254 WRASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFI 433
W L + ++ TKEKFEV LDVQ FTP EI VK S +++ +HE + D HG +
Sbjct: 14 WDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTV 73
Query: 434 SRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKR 541
+R+ R Y LP +V+ + S L++ GVLT+TA K+
Sbjct: 74 AREINRAYKLPDDVDVSTVKSHLATRGVLTITASKK 109
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = +2
Query: 308 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 487
+++ V +DV QF P+E+ V +N +++EGKH EK D++G + R F R+Y LPTG
Sbjct: 55 QEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQ 114
Query: 488 LVSTLSSDGVLTVTAPKRPPPNAGERIVPIT 580
+ S LS++GVLTV K + +PIT
Sbjct: 115 IKSELSNNGVLTVKYEKNQEQQ--PKSIPIT 143
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = +2
Query: 308 EKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVND 487
+++ V +DV QF P+E+ V +N +++EGKH EK D++G + R F R+Y LPTG
Sbjct: 54 QEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQ 113
Query: 488 LVSTLSSDGVLTVTAPKRPPPNAGERIVPIT 580
+ S LS++GVLTV K + +PIT
Sbjct: 114 IKSELSNNGVLTVKYEKNQEQQ--PKSIPIT 142
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/97 (36%), Positives = 52/97 (53%)
Frame = +2
Query: 287 STINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILP 466
++I +T F ILDV ++ D + V +N ++VEG H EK+D +G I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 467 TGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPI 577
+ S L++DG LT+ A P G R + I
Sbjct: 132 KAVAPESVQSQLTADGHLTIDAKAPEPKQEGARPIQI 168
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 70.1 bits (164), Expect = 2e-12
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +2
Query: 302 TKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 481
T +KF V LDV F P+E+ V + + +EG HE K EHGF R FTR++ LP ++
Sbjct: 49 TAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKT-EHGFSKRSFTRQFTLPKDVDL 107
Query: 482 NDLVSTLSSDGVLTVTAPKRPPPNAGERIVPI-TKTGPAKQPEAASS 619
+ + ++ +G +T+ APK N R +PI T G A + +S+
Sbjct: 108 AHIHTVINKEGQMTIDAPK-TGSNTTVRALPIHTSAGHAVTQKPSST 153
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +2
Query: 278 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRY 457
ESS +N +KF + L+V QF P+++ + +T+ ++G+ E K EHG+ + F+R
Sbjct: 39 ESSEIVN-NDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKT-EHGYSKKSFSRVI 96
Query: 458 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQ 601
+LP +V + S LS DG L++ APK+ R +PI + P +Q
Sbjct: 97 LLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQG--RSIPI-QQAPVEQ 141
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +2
Query: 278 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRY 457
ESS +N +KF + L+V QF P+++ + +T+ ++G+ E K EHG+ + F+R
Sbjct: 39 ESSEIVN-NDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKT-EHGYSKKSFSRVI 96
Query: 458 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQ 601
+LP +V + S LS DG L++ APK+ R +PI + P +Q
Sbjct: 97 LLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQG--RSIPI-QQAPVEQ 141
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Frame = +2
Query: 281 SSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYI 460
+S+ +N +F V +D QF P+EI VK ++T+++EG+HE+ +D+ F F R+Y
Sbjct: 104 NSNVVN-DDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQ 162
Query: 461 LPTGYEVNDLVSTLSSDGVLTVTAPK--RPPPNAGERIVPITKTG 589
LP + N + S++ + G L V A K ER++PI G
Sbjct: 163 LPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = +2
Query: 266 LARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQF 445
++ ESS +N +KF + L+V QF P+++ + T+ ++G+ E K D HG+ + F
Sbjct: 35 ISPSESSEIVN-NDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSF 92
Query: 446 TRRYILPTGYEVNDLVSTLSSDGVLTVTAPKR 541
+R +LP +V + S LS DG L++ APK+
Sbjct: 93 SRVILLPEDVDVGAVASNLSEDGKLSIEAPKK 124
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = +2
Query: 278 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRY 457
ESS +N +KF + L+V QF P+++ + +T+ ++G+ E K EHG+ + F+R
Sbjct: 39 ESSEIVN-NDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKT-EHGYSKKSFSRVI 96
Query: 458 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQ 601
+LP +V + S LS DG L++ APK+ R +PI + P +Q
Sbjct: 97 LLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQG--RSIPI-QQAPVEQ 141
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/108 (34%), Positives = 61/108 (56%)
Frame = +2
Query: 278 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRY 457
ESS I +KF + L+V QF P+++ + +T+ ++G+ E K EHG+ + F+R
Sbjct: 39 ESSEQIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKT-EHGYSKKSFSRVI 97
Query: 458 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQ 601
+LP +V + S LS DG L++ APK+ R +PI + P +Q
Sbjct: 98 LLPEDVDVGAVASNLSEDGKLSIEAPKKEAIQG--RSIPI-QQAPVEQ 142
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = +2
Query: 266 LARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQF 445
++ ESS +N +KF + L+V QF P+++ + T+ ++G+ E K D HG+ + F
Sbjct: 35 ISPSESSEIVN-NDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSF 92
Query: 446 TRRYILPTGYEVNDLVSTLSSDGVLTVTAPKR 541
+R +LP +V + S LS DG L++ APK+
Sbjct: 93 SRVILLPEDVDVGAVASNLSEDGKLSIEAPKK 124
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +2
Query: 254 WRASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFI 433
W L + + T EKFEV LD F P++I VK + +++ +H+ + E+G +
Sbjct: 14 WDWPLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIV 73
Query: 434 SRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPK 538
+R+ R Y LP + + + S L+S GVLT+TA K
Sbjct: 74 NREVHRTYKLPEDVDPSTVRSHLNSSGVLTITANK 108
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +2
Query: 329 DVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSS 508
DV + P+E+TVK +N ++V KHEEK + + R++ + ++LP G + STLS+
Sbjct: 33 DVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTNPEQISSTLST 91
Query: 509 DGVLTVTAP 535
DGVLTV AP
Sbjct: 92 DGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +2
Query: 329 DVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSS 508
DV + P+E+TVK +N ++V KHEEK + + R++ + ++LP G + STLS+
Sbjct: 130 DVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTNPEQISSTLST 188
Query: 509 DGVLTVTAP 535
DGVLTV AP
Sbjct: 189 DGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +2
Query: 329 DVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSS 508
DV + P+E+TVK +N ++V KHEEK + + R++ + ++LP G + STLS+
Sbjct: 144 DVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGTNPEQISSTLST 202
Query: 509 DGVLTVTAP 535
DGVLTV AP
Sbjct: 203 DGVLTVEAP 211
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 61.3 bits (142), Expect = 7e-10
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 254 WRASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQD---EH 424
W L + + T EKFEV LD F P++I VK + +++ +H+ Q+ E+
Sbjct: 14 WDWPLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEY 73
Query: 425 GFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPK 538
G ++R+ R Y LP + + + S L+S GVLT+TA K
Sbjct: 74 GIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITANK 111
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+++ ++ + +EG +EK+ EHG+ R F++ +LP ++
Sbjct: 43 ESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILLPEDVDLT 101
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 102 SVKSAISNEGKLQIEAPKK 120
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+++ ++ + +EG +EK+ EHG+ R F++ +LP ++
Sbjct: 51 ESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILLPEDVDLT 109
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 110 SVKSAISNEGKLQIEAPKK 128
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+++ ++ + +EG +EK+ EHG+ R F++ +LP ++
Sbjct: 51 ESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILLPEDVDLT 109
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 110 SVKSAISNEGKLQIEAPKK 128
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+++ ++ + +EG +EK+ EHG+ R F++ +LP ++
Sbjct: 52 ESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILLPEDVDLT 110
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 111 SVKSAISNEGKLQIEAPKK 129
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+++ ++ + +EG +EK+ EHG+ R F++ +LP ++
Sbjct: 51 ESKFSVQLDVSHFKPEDLKIELDGRELKIEGI-QEKKSEHGYSKRSFSKMILLPEDVDLT 109
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 110 SVKSAISNEGKLQIEAPKK 128
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 61.3 bits (142), Expect = 7e-10
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 254 WRASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQD---EH 424
W L + + T EKFEV LD F P++I VK + +++ +H+ Q+ E+
Sbjct: 14 WDWPLQHNDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEY 73
Query: 425 GFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPK 538
G ++R+ R Y LP + + + S L+S GVLT+TA K
Sbjct: 74 GIVNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITANK 111
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +2
Query: 287 STINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILP 466
S I + +KF V L+V F P+E+ V + ++G+H+ ++EHG + F+R +LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHDV-ENEHGASRKSFSRMILLP 101
Query: 467 TGYEVNDLVSTLSSDGVLTVTAPK 538
++ + + LS+DG L + APK
Sbjct: 102 EDVDITSVATNLSNDGKLCIEAPK 125
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+ + +K + +EG E K EHG++ R F++ +LP ++
Sbjct: 5 ESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKS-EHGYLKRSFSKMILLPEDADLP 63
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 64 SVKSAISNEGKLQIEAPKK 82
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+ + +K + +EG E K EHG++ R F++ +LP ++
Sbjct: 52 ESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKS-EHGYLKRSFSKMILLPEDADLP 110
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 111 SVKSAISNEGKLQIEAPKK 129
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
+ KF V LDV F P+ + +K + +EG E K EHG++ R F++ +LP ++
Sbjct: 51 ESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKS-EHGYLKRSFSKMILLPEDADLP 109
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S +S++G L + APK+
Sbjct: 110 SVKSAISNEGKLQIEAPKK 128
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 275 QESSSTINLTKEK--FEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFT 448
Q+ +N+ + FEV L+ F P EI VK + + +H K+D G +SR T
Sbjct: 19 QKGDGVVNVLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNIT 78
Query: 449 RRYILPTGYEVNDLVSTLSSDGVLTVTAPK 538
R Y LP ++ + S L S G+L + A K
Sbjct: 79 RCYKLPKNVDMKTIKSNLDSHGILHIEARK 108
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 55.2 bits (127), Expect = 5e-08
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 275 QESSSTINLTKEK--FEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFT 448
Q+ +N+ + FEV L+ F P EI VK + + +H K+D G +SR T
Sbjct: 19 QKGDGVVNVLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNIT 78
Query: 449 RRYILPTGYEVNDLVSTLSSDGVLTVTAPK 538
R Y LP ++ + S L S G+L + A K
Sbjct: 79 RCYKLPKNVDMKTIKSNLDSHGILHIEARK 108
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/79 (34%), Positives = 41/79 (51%)
Frame = +2
Query: 305 KEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVN 484
++ FEV L+ F P+EI VK + + H K D+ G I+R TR Y LP G +
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 485 DLVSTLSSDGVLTVTAPKR 541
+ S L G+L ++ K+
Sbjct: 90 TIKSKLDGSGILHISGNKK 108
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/79 (29%), Positives = 44/79 (55%)
Frame = +2
Query: 302 TKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEV 481
T EKF V L+V P+E+ + + ++ +H+E ++++ ++ +++ +LP +V
Sbjct: 47 THEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPEDVDV 106
Query: 482 NDLVSTLSSDGVLTVTAPK 538
L S LS DG L + PK
Sbjct: 107 THLSSNLSEDGKLLIEVPK 125
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 293 INLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTG 472
I T F + +DV F P+EI V +++T+ + G+ E + + R F+R+Y +P
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDD 156
Query: 473 YEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASS 619
++ + S L++ GVL + ++ G R I+ P Q A S
Sbjct: 157 VHLDTIRSHLTNSGVLIINGSRK-----GWRETSISSYHPTTQRNVARS 200
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +2
Query: 293 INLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTG 472
I T F + +DV F P+EI V +++T+ + G+ E + + R F+R+Y +P
Sbjct: 97 ITNTSHGFTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDD 156
Query: 473 YEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASS 619
++ + S L++ GVL + ++ G R I+ P Q A S
Sbjct: 157 VHLDTIRSHLTNSGVLIINGSRK-----GWRETSISSYHPTTQRNVARS 200
>Z12017-7|CAH19088.1| 856|Caenorhabditis elegans Hypothetical
protein R08D7.6c protein.
Length = 856
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 188 RPSSDPCRSAGPVVWRGARYAPSHPTNRET 99
+ S++P SA P VWR + P H N ET
Sbjct: 54 KSSNEPAGSASPTVWRKTSHPPLHFNNNET 83
>Z12017-6|CAE47469.1| 734|Caenorhabditis elegans Hypothetical
protein R08D7.6b protein.
Length = 734
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 188 RPSSDPCRSAGPVVWRGARYAPSHPTNRET 99
+ S++P SA P VWR + P H N ET
Sbjct: 57 KSSNEPAGSASPTVWRKTSHPPLHFNNNET 86
>Z12017-5|CAA78052.2| 859|Caenorhabditis elegans Hypothetical
protein R08D7.6a protein.
Length = 859
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 188 RPSSDPCRSAGPVVWRGARYAPSHPTNRET 99
+ S++P SA P VWR + P H N ET
Sbjct: 57 KSSNEPAGSASPTVWRKTSHPPLHFNNNET 86
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 663 TMGTICSRGCCCSGFEDAASGCLAGPVFVIGTILSPALGGGRF 535
++ ++C +GCCC G + + C GP + L G G F
Sbjct: 65 SVASVCVQGCCCPGNNNLDTACSGGP--AVAACLGGLCGQGFF 105
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 518 LTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP 673
L T P A IVP+T T P + P + E++ P+VT+P
Sbjct: 530 LASTTSATPAVTAPASIVPVTPTAPIVETLIVPPLPPVESNPEEVTPMVTAP 581
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 530 APKRPPPNAGERIVPI-TKTGPAKQPEAASSKPEQQQPRE 646
+PK+ P A E+ P+ K PA ++ + +PE+ +PR+
Sbjct: 576 SPKKVAPTAPEKKTPVLAKKEPAGPADSKTKEPEKSKPRD 615
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 539 RPPPNAGERIVPITKTGP-AKQPE---AASSKPEQQQPREQMV-PIVTSP*PP 682
+PP AG RIVP++ P A PE AS +PR V P +P PP
Sbjct: 294 QPPSPAGRRIVPLSMPSPHAVTPELKRLASKDSNVDRPRTPPVTPASAAPPPP 346
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +2
Query: 539 RPPPNAGERIVPITKTGP-AKQPE---AASSKPEQQQPREQMV-PIVTSP*PP 682
+PP AG RIVP++ P A PE AS +PR V P +P PP
Sbjct: 294 QPPSPAGRRIVPLSMPSPHAVTPELKRLASKDSNVDRPRTPPVTPASAAPPPP 346
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 29.5 bits (63), Expect = 2.6
Identities = 37/154 (24%), Positives = 55/154 (35%), Gaps = 13/154 (8%)
Frame = +2
Query: 260 ASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKH--------EEKQ 415
+S A + + TKE V DE+ +K + + + K+ E
Sbjct: 177 SSAASASTDAETTKTKEMARVKFVYNPQHDDELALKEIDMLINITNKNCGDAGWFEGELH 236
Query: 416 DEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVP--ITKTG 589
+ G F +P G E ++S LT + K PP N + VP K
Sbjct: 237 GKKGLFPDNFVELVQVPLGTESGARHGSISRQATLTFVSHKPPPVNPPQPAVPPKPAKIS 296
Query: 590 PAKQPEA--ASSKPEQQQPR-EQMVPIVTSP*PP 682
A P + A + P P Q+ P TSP P
Sbjct: 297 VADPPPSTIAPAAPSAPAPAPSQLNPTSTSPTMP 330
>Z81110-4|CAB03256.1| 381|Caenorhabditis elegans Hypothetical
protein T01D3.5 protein.
Length = 381
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 353 EITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSS 508
++ V+ +N E +HEEKQ HG I Q Y L G+ + LV + S
Sbjct: 143 DVLVETHSNNEHDEKEHEEKQHSHGNIHAQI--GYSLVLGFVLMLLVDQIGS 192
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 533 PKRPPPNAGE-RIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP 682
P+ PPP + R P+T P ++P PE + P + P P PP
Sbjct: 147 PRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNP-PRTPPSPIPPPPP 196
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 539 RPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP*CRAQRP 703
+P P++ + V + P K + SS +Q +Q + TS PP A+RP
Sbjct: 1433 KPGPSSASKSVSSIRQTPTKVLDPLSSAAKQPNEPDQTTGLKTSQQPPSFAAKRP 1487
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 539 RPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*PP*CRAQRP 703
+P P++ + V + P K + SS +Q +Q + TS PP A+RP
Sbjct: 1433 KPGPSSASKSVSSIRQTPTKVLDPLSSAAKQPNEPDQTTGLKTSQQPPSFAAKRP 1487
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 278 VSSPAGIPRVPSTLRTTQASTCMNSAC 304
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 282 VSSPAGIPRVPSTLRTTQASTCMNSAC 308
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 277 VSSPAGIPRVPSTLRTTQASTCMNSAC 303
>AF047660-8|AAM54167.1| 526|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform b protein.
Length = 526
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 184 VSSPAGIPRVPSTLRTTQASTCMNSAC 210
>AF047660-7|AAM54166.1| 577|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform a protein.
Length = 577
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 235 VSSPAGIPRVPSTLRTTQASTCMNSAC 261
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 317 VSSPAGIPRVPSTLRTTQASTCMNSAC 343
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 438 VSSPAGTSCRPDTRSTTWSARCLPTAC 518
VSSPAG P T TT ++ C+ +AC
Sbjct: 391 VSSPAGIPRVPSTLRTTQASTCMNSAC 417
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 590 PAKQPEAASSKPEQQQPREQMVPIVTSP*PP 682
PA+Q A + P Q +P Q PI+ + PP
Sbjct: 82 PAQQKPVAQAPPAQAKPTVQQAPILVAQAPP 112
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 542 PPPNAGERIVPITKTGPAKQPEAASSKPEQQQ--PREQMVP 658
PPP P+ + P QP+ A ++P QQ P +Q P
Sbjct: 191 PPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASP 231
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 530 APKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPR 643
AP+ PP + + TGP++ + P+ +QPR
Sbjct: 670 APRTVPPKTEAPMTEVPMTGPSRTEVPMTEPPKTEQPR 707
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 596 KQPEAASSKPEQQQPREQMVPIVTSP*PP 682
KQPE +SS PE + PR +S PP
Sbjct: 64 KQPETSSSSPEHRSPRRSKSAPPSSSNPP 92
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +2
Query: 524 VTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP*P 679
VT P PPP P T P PE S+ E P + VT+ P
Sbjct: 154 VTTPTPPPPTT---TTPTTTLKPTTSPEKHSTTEEATSPSQNETTSVTTQNP 202
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -3
Query: 672 GEVTMGTICSRGCCCSGFEDAASGCLAGPVFVIGTILSPALGGGRFGAVTVS 517
G+ G CS G CC+G CL G V I P+ G G V VS
Sbjct: 981 GQCGTGYTCSNGLCCAGTSTTVK-CLDGSDAVGACI--PSCTGDGCGGVQVS 1029
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -3
Query: 672 GEVTMGTICSRGCCCSGFEDAASGCLAGPVFVIGTILSPALGGGRFGAVTVS 517
G+ G CS G CC+G CL G V I P+ G G V VS
Sbjct: 323 GQCGTGYTCSNGLCCAGTSTTVK-CLDGSDAVGACI--PSCTGDGCGGVQVS 371
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -3
Query: 672 GEVTMGTICSRGCCCSGFEDAASGCLAGPVFVIGTILSPALGGGRFGAVTVS 517
G+ G CS G CC+G CL G V I P+ G G V VS
Sbjct: 323 GQCGTGYTCSNGLCCAGTSTTVK-CLDGSDAVGACI--PSCTGDGCGGVQVS 371
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Frame = +2
Query: 464 PTGYE-VNDLVSTLSSDGVLTVTAPKRPPPNAGER----IVPITKTGPAKQPEAASSKPE 628
PT E V +L T + +AP RPPP E + P + P AA P
Sbjct: 662 PTASEPVQELSPTPEASSSTGTSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARPPPP 721
Query: 629 QQQPREQMVPIVTSP 673
+ P + P P
Sbjct: 722 RPAPANKEKPKEPEP 736
>Z74475-5|CAA98959.2| 279|Caenorhabditis elegans Hypothetical
protein R04F11.1 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 160 ALRHGSEEGRSVILHQFIP 216
AL G EE R ++LH+F+P
Sbjct: 90 ALEKGDEEARELLLHRFLP 108
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 464 PTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAK-QPEAASSKPEQQQP 640
P + L+ T+S G ++ P P + P P + QP+A+SSKP+Q +
Sbjct: 399 PVNPTIWPLMPTVS--GADSLPGPSSQAPQQFRQNGPAATAAPVESQPQASSSKPQQPEE 456
Query: 641 REQ 649
E+
Sbjct: 457 WEE 459
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 464 PTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAK-QPEAASSKPEQQQP 640
P + L+ T+S G ++ P P + P P + QP+A+SSKP+Q +
Sbjct: 596 PVNPTIWPLMPTVS--GADSLPGPSSQAPQQFRQNGPAATAAPVESQPQASSSKPQQPEE 653
Query: 641 REQ 649
E+
Sbjct: 654 WEE 656
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 521 TVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP 673
T + P +P +GE + PA PE + S+P P + P +SP
Sbjct: 561 TPSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSP 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,429,061
Number of Sequences: 27780
Number of extensions: 325017
Number of successful extensions: 1577
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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