Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_L14
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF304120-1|AAG50233.1| 213|Caenorhabditis elegans 4D656 protein. 120 1e-27
AC024817-36|AAF59580.1| 213|Caenorhabditis elegans Hypothetical... 120 1e-27
Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical pr... 33 0.32
Z68320-2|CAA92706.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.32
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 30 1.7
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 30 2.3
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.3
U42436-8|AAF99897.3| 950|Caenorhabditis elegans Importin beta f... 29 4.0
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 5.3
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 7.0
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 7.0
AL161712-2|CAC70128.1| 313|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81545-6|CAB04441.1| 287|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL137227-11|CAB70241.2| 328|Caenorhabditis elegans Hypothetical... 28 9.2
AL033536-11|CAC15866.1| 328|Caenorhabditis elegans Hypothetical... 28 9.2
>AF304120-1|AAG50233.1| 213|Caenorhabditis elegans 4D656 protein.
Length = 213
Score = 120 bits (289), Expect = 1e-27
Identities = 61/158 (38%), Positives = 93/158 (58%)
Frame = +3
Query: 153 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 332
M++QWT +AG LY EIA+ ++LP P W++ FKSRLF+ ++ +Y F VL
Sbjct: 1 MTLQWTIVAGVLYAEIAITFTLLLPWIRPTLWSKLFKSRLFTALAKHAHIYSITFGFVLF 60
Query: 333 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 512
+ D VRE KY+ + ++ H++LFRAQRN YI GFA+ L VI+R++T+
Sbjct: 61 ILFADGVRETMKYNGLEGQMGRTAESDATHHMRLFRAQRNLYISGFALLLWLVIQRIMTL 120
Query: 513 LIIQDELKQKAEKIIKQAEETVKQAKTSILANTLQSEE 626
L +L+ +E ++QAE K A+T L N+ + E
Sbjct: 121 LGRAAQLEAASEAAMRQAESATKTART--LMNSADTNE 156
>AC024817-36|AAF59580.1| 213|Caenorhabditis elegans Hypothetical
protein Y54G2A.18 protein.
Length = 213
Score = 120 bits (289), Expect = 1e-27
Identities = 61/158 (38%), Positives = 93/158 (58%)
Frame = +3
Query: 153 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 332
M++QWT +AG LY EIA+ ++LP P W++ FKSRLF+ ++ +Y F VL
Sbjct: 1 MTLQWTIVAGVLYAEIAITFTLLLPWIRPTLWSKLFKSRLFTALAKHAHIYSITFGFVLF 60
Query: 333 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 512
+ D VRE KY+ + ++ H++LFRAQRN YI GFA+ L VI+R++T+
Sbjct: 61 ILFADGVRETMKYNGLEGQMGRTAESDATHHMRLFRAQRNLYISGFALLLWLVIQRIMTL 120
Query: 513 LIIQDELKQKAEKIIKQAEETVKQAKTSILANTLQSEE 626
L +L+ +E ++QAE K A+T L N+ + E
Sbjct: 121 LGRAAQLEAASEAAMRQAESATKTART--LMNSADTNE 156
>Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical
protein F53B2.4 protein.
Length = 325
Score = 32.7 bits (71), Expect = 0.32
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Frame = +3
Query: 156 SIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAV-YFYVFIGVLA 332
SI +T+++ F L L ++P++ PRR NQ +RL N A+ + Y++ +
Sbjct: 117 SIYFTYVSWL--FPFLLSTLRLIPVYFPRRHNQLC-ARL-----SNFAIPFIYLYPFIFT 168
Query: 333 LFLIDAVREIRKYSNVTDVSHTHL-ATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLIT 509
LI A+ R+ + T +KL N ++ AI+L I +T
Sbjct: 169 FSLIPALGSCRQLLGPYKFGSIFIWFTGNWFDIKLI----NGLVLNLAIWLLLCIISNLT 224
Query: 510 MLIIQDELK-QKAEKIIKQAEETVKQAKTSILANTL 614
+LI +LK + I+++AE ++ S+L + L
Sbjct: 225 LLIKLKKLKNNRKSAILQRAELSLSLTTLSMLLSFL 260
>Z68320-2|CAA92706.1| 502|Caenorhabditis elegans Hypothetical
protein W07A12.7 protein.
Length = 502
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1
Query: 786 IIHLLCRVYWQWLPHISAATF*HHPLVISLYPFLTLIGF*FPLIDYLF 643
++H+ + WLP + AAT H L++ PF+ ++ F LI YLF
Sbjct: 439 LLHMPVVYIFNWLPFLQAATSPIHLLLV--LPFVAILSFIAALIFYLF 484
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -3
Query: 634 CCNSSDCKVFARILVLACFTVSSACFIIFSAFCFNSSCIINIVISLRITNV 482
CC + + I++L FT+S+A +F C+N + +++I L IT V
Sbjct: 86 CCGNLRRQFPVNIILLTIFTLSAAVMTMFVTACYN---VQSVLICLCITTV 133
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +3
Query: 480 LTFVIRRLITMLIIQDELKQKAEKIIKQAEETVKQAKTSILANTLQSEELQHYDEINS 653
L F+I RL+ + + + ++ K I+ AEE +K A + A+ +++E DE+++
Sbjct: 188 LLFIIGRLLKLNVKEHKISSKRPGIVMSAEE-LKTAPKQLSADEKRAKEKSVLDEVDA 244
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +3
Query: 480 LTFVIRRLITMLIIQDELKQKAEKIIKQAEETVKQAKTSILANTLQSEELQHYDEINS 653
L F+I RL+ + + + ++ K I+ AEE +K A + A+ +++E DE+++
Sbjct: 1251 LLFIIGRLLKLNVKEHKISSKRPGIVMSAEE-LKTAPKQLSADEKRAKEKSVLDEVDA 1307
>U42436-8|AAF99897.3| 950|Caenorhabditis elegans Importin beta
family protein 6 protein.
Length = 950
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 183 YLYFEIALVMLMILPIFSPRRWNQFFKSRLFS-MFRENVAVYFYVFIGVLALFLIDAVRE 359
+L ++A + ++ P RW+ FF FS + +FY+ + +LA+ R+
Sbjct: 100 FLTNKMAHIFSLVFAADFPERWSSFFNDLFFSDNINDRKVAFFYLKV-LLAIDTEVVNRD 158
Query: 360 IRKYSNVTD 386
I++ N +D
Sbjct: 159 IQRSKNESD 167
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 492 IRRLITMLIIQDELKQKAEKIIKQAEETVKQAKTSILANTLQSEELQHYDEINSQ 656
+RR +L + + K+K E +I + VK K + + E LQ E +Q
Sbjct: 393 LRRKARLLTVVEAAKEKLESVISDLQVEVKALKNKVEFLEKERENLQSQSESQTQ 447
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 522 QDELKQKAEKIIKQAEETVKQAKTSILANTLQSEELQHYDE----INSQXXXXXXXXXXX 689
Q + + EK I + EETVKQ + S A QSEEL+ +E + ++
Sbjct: 288 QHIVNENLEKKIGEGEETVKQLQISYDA---QSEELKQRNERVVQLEARIEENVFELSEN 344
Query: 690 XDRVKLLEDDVKMWQQKCEEAIASKPGKGDE 782
VK LED V+ Q + +++ G +E
Sbjct: 345 KQNVKRLEDKVQE-SQDALQMLSNINGSNEE 374
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 522 QDELKQKAEKIIKQAEETVKQAKTSILANTLQSEELQHYDE----INSQXXXXXXXXXXX 689
Q + + EK I + EETVKQ + S A QSEEL+ +E + ++
Sbjct: 290 QHIVNENLEKKIGEGEETVKQLQISYDA---QSEELKQRNERVVQLEARIEENVFELSEN 346
Query: 690 XDRVKLLEDDVKMWQQKCEEAIASKPGKGDE 782
VK LED V+ Q + +++ G +E
Sbjct: 347 KQNVKRLEDKVQE-SQDALQMLSNINGSNEE 376
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 522 QDELKQKAEKIIKQAEETVKQAKTSILANTLQSEELQHYDE----INSQXXXXXXXXXXX 689
Q + + EK I + EETVKQ + S A QSEEL+ +E + ++
Sbjct: 290 QHIVNENLEKKIGEGEETVKQLQISYDA---QSEELKQRNERVVQLEARIEENVFELSEN 346
Query: 690 XDRVKLLEDDVKMWQQKCEEAIASKPGKGDE 782
VK LED V+ Q + +++ G +E
Sbjct: 347 KQNVKRLEDKVQE-SQDALQMLSNINGSNEE 376
>AL161712-2|CAC70128.1| 313|Caenorhabditis elegans Hypothetical
protein Y66D12A.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 592 VLACFTVSSACFIIFSAFCFNSSCIINIVISLRITNVRKIAKPII 458
+L CF F+I AF S ++NI+ S+ VR KPI+
Sbjct: 265 ILNCFENRLPEFLIDVAFGIESEEVVNIIDSVNSPVVRLTEKPIL 309
>Z81545-6|CAB04441.1| 287|Caenorhabditis elegans Hypothetical
protein F49H6.7 protein.
Length = 287
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 327 LALFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLI 506
+ L I + E+RK N+T + +T++ T + +F N G A ++F I
Sbjct: 174 IPLTTILLISELRKSRNMTSKHQENRSTKLVTWMTIFFTLAN-APYGLAYSISFWFSNYI 232
Query: 507 TMLIIQ 524
TML+ Q
Sbjct: 233 TMLMAQ 238
>AL137227-11|CAB70241.2| 328|Caenorhabditis elegans Hypothetical
protein F58D5.8 protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 628 NSSDCKVFARILVLACFTVSSACFIIFSAFCFNSSCII 515
N +D KVF+ ILV+ +SS+ ++++ +SCI+
Sbjct: 101 NYADGKVFSAILVMLIIELSSSLIMLYAIKNPGASCIL 138
>AL033536-11|CAC15866.1| 328|Caenorhabditis elegans Hypothetical
protein F58D5.8 protein.
Length = 328
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = -3
Query: 628 NSSDCKVFARILVLACFTVSSACFIIFSAFCFNSSCII 515
N +D KVF+ ILV+ +SS+ ++++ +SCI+
Sbjct: 101 NYADGKVFSAILVMLIIELSSSLIMLYAIKNPGASCIL 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,831,006
Number of Sequences: 27780
Number of extensions: 302262
Number of successful extensions: 953
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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