Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_L08
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4JLG0 Cluster: Lr1631; n=3; Lactobacillus reuteri|Rep:...    35   2.1  
UniRef50_A0EGM3 Cluster: Chromosome undetermined scaffold_95, wh...    33   4.9  
UniRef50_Q54VS9 Cluster: Putative uncharacterized protein; n=4; ...    33   8.5  
UniRef50_A1ZBS3 Cluster: CG8908-PB, isoform B; n=2; Drosophila m...    33   8.5  

>UniRef50_Q4JLG0 Cluster: Lr1631; n=3; Lactobacillus reuteri|Rep:
           Lr1631 - Lactobacillus reuteri
          Length = 719

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = -1

Query: 264 RISTSKQIVNKSVHHTNVYLIWESNPRYFFAFDANKKSESNIAIAFTA 121
           +I+ SKQ+  K+V+  N+Y   +S  ++F     NK  +S+ A A TA
Sbjct: 237 QIANSKQVTKKAVNGDNIYTTLDSQTQHFLENKVNKVYKSSNANAMTA 284


>UniRef50_A0EGM3 Cluster: Chromosome undetermined scaffold_95, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_95,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 697

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -3

Query: 496 QCESGIGGLLRFHVLTTQLVKTKFFVQIVRLQNNKKKISSEKSHMFSWPQT 344
           +CE G+G  L    L  QL+KTK  +QI+ LQN+  K     S+ +   +T
Sbjct: 628 RCEGGLGNNLVEKSL--QLMKTKCMIQILSLQNSLLKTQGNNSYSYQEKKT 676


>UniRef50_Q54VS9 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1341

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = -3

Query: 475 GLLRFHVLTTQLVKTKFFVQIVRLQNNKKKISSEKSHMFSWPQTR*INT*LYL*KYVYNI 296
           G++ F + T  L+K  F V  +   N++  I  + S+  S+  T      LY   Y +N 
Sbjct: 484 GIIEF-IYTYGLLKNDFIVLNIYDSNSEYTILEQNSYYQSFLDTLSFPQ-LYDQNYDFNA 541

Query: 295 *NGSILSFIYTDINIQTNS 239
            N S +SF Y D+N+ TNS
Sbjct: 542 ENISKISFFYNDVNL-TNS 559


>UniRef50_A1ZBS3 Cluster: CG8908-PB, isoform B; n=2; Drosophila
           melanogaster|Rep: CG8908-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 1665

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +3

Query: 327 YVFIYLVWGQLNMCDFSELIFFLLFCNLTICTKNFVLTSWVVKT 458
           ++ + L W   ++ D S ++FFLL  NL + T  F+++S+   T
Sbjct: 285 FMVLLLKWRYFSLSDSSLVLFFLLVYNLEVLTSAFMISSFFSDT 328


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,740,019
Number of Sequences: 1657284
Number of extensions: 14130691
Number of successful extensions: 27853
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27851
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)