Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_K24
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 47 2e-07
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 40 2e-05
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 40 2e-05
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 36 5e-04
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 29 0.057
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 2.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.9
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 4.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 4.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 4.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 4.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 4.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 4.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 651 DLLLPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSGDLYIXGLKWSDMGNYTCVAKN 830
D+ LPC +V W+ V ++ R+R LP G L+I + +D G Y+C +N
Sbjct: 1293 DVKLPCLAVGVPAPEVTWKV--RGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVEN 1350
Query: 831 IYGKDT 848
+G DT
Sbjct: 1351 TFGHDT 1356
Score = 37.5 bits (83), Expect = 2e-04
Identities = 47/185 (25%), Positives = 69/185 (37%), Gaps = 5/185 (2%)
Frame = +3
Query: 300 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVSKLVVVAP--T 473
G + L+C+ G P P + W +G+ + E +T +VS L + +
Sbjct: 408 GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVN---GDVVSHLNISSTHTN 464
Query: 474 DGDRYTCAASA--GLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIG 647
DG Y C A++ G SA VY P I H G
Sbjct: 465 DGGLYKCIAASKVGSAEHSARLNVYGL------------------PFIR-HMDKKAIVAG 505
Query: 648 TDLLLPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSGDLYIXGL-KWSDMGNYTCVA 824
L + C V Y + W+ L + +V P+G L I + + SD YTCVA
Sbjct: 506 ETLRVTCPVAGYPIESIVWERDTRVLPINR--KQKVFPNGTLIIENVERMSDQATYTCVA 563
Query: 825 KNIYG 839
+N G
Sbjct: 564 RNAQG 568
Score = 29.9 bits (64), Expect = 0.032
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +3
Query: 294 TTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVSKLVVVAPT 473
T ++L CL +G PAP V W G ++ + L + F K V + T
Sbjct: 1289 TYKEDVKLPCLAVGVPAPEVTWKVRGAVLQSSDRLRQ---LPEGSLFIKEVDR------T 1339
Query: 474 DGDRYTCAASAGLKRDSAT 530
D Y+C D+ T
Sbjct: 1340 DAGEYSCYVENTFGHDTVT 1358
Score = 28.7 bits (61), Expect = 0.075
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +3
Query: 633 FQNIGTDLLLPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSGDLYIXGLKWSDMGN- 809
F N GT ++ C+ + + W D + V + G +VLP+G+L + D
Sbjct: 15 FSN-GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQE 73
Query: 810 -----YTCVAKNIYG 839
Y+C+A++ G
Sbjct: 74 VHAQVYSCLARSPAG 88
Score = 28.7 bits (61), Expect = 0.075
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 264 SQAPPDTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPI 380
++ P T G C + G P V WLK+G+P+
Sbjct: 310 AEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 27.9 bits (59), Expect = 0.13
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Frame = +3
Query: 645 GTDLLLPCRVFSYAKTQVYWQYGDNNLVYETFGR--IR--VLPSG---DLYIXGLKWSDM 803
G +L C + W + L ++ R IR +L +G DL I + SD
Sbjct: 791 GEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDS 850
Query: 804 GNYTCVAKNIYGKDTGS 854
+TCVA N +G D S
Sbjct: 851 ALFTCVATNAFGSDDTS 867
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 273 PPDTVHHTTGSQLELECLIIGKPAPIVEWLK 365
PP+ V + G+ +EC G P P + W++
Sbjct: 9 PPNRVDFSNGTGAVVECQARGNPQPDIIWVR 39
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 744 RIRVLPSGDLYIXGLKWSDMGNYTCVAKNIYGKDT 848
R+R + SG L I + D G Y C+ N G ++
Sbjct: 264 RVRQV-SGTLIIREARVEDSGKYLCIVNNSVGGES 297
Score = 23.8 bits (49), Expect = 2.1
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +3
Query: 645 GTDLLLPCRVFSYAKTQVYWQ--YGDNNLVYETFGRIR---VLPSGDLYIXGLKWSDMGN 809
G+D + C+ + K QV W+ GD Y + G L I ++ ++ G
Sbjct: 693 GSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGY 752
Query: 810 YTCVAKNIYG 839
Y C A N G
Sbjct: 753 YLCEAVNGIG 762
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 741 GRIRVLPSGDLYIXGLKWSD-MGNYTCVAKN 830
G+ VLPSG+L+I + D Y C K+
Sbjct: 155 GKYLVLPSGELHIRDVGPEDGYKTYQCRTKH 185
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 40.3 bits (90), Expect = 2e-05
Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 4/184 (2%)
Frame = +3
Query: 300 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEE-ATNEVILTDPESFAKIVSKLVVVAPTD 476
G + L+C G P P V W +G + + + + + + V+V D
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVE--D 493
Query: 477 GDRYTCAAS--AGLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIGT 650
G Y+C A AG +A VY + + P +T AV G
Sbjct: 494 GGEYSCMAENRAGKVTHAARLNVY------------GLPYIRLIPKVT----AV---AGE 534
Query: 651 DLLLPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSGDLYIXGL-KWSDMGNYTCVAK 827
L L C V Y ++ W+ + L + R +VLP G L I + K D G YTC A+
Sbjct: 535 TLRLKCPVAGYPIEEIKWERANRELPDDL--RQKVLPDGTLVITSVQKKGDAGVYTCSAR 592
Query: 828 NIYG 839
N G
Sbjct: 593 NKQG 596
Score = 37.9 bits (84), Expect = 1e-04
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 702 WQYGDNNLVYETFGR-IRVLPSGDLYIXGLKWSDMGNYTCVAKNIYGKD 845
W G + R I++LPSG+L + L+ D G+YTC +N G D
Sbjct: 1345 WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGND 1393
Score = 30.7 bits (66), Expect = 0.019
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Frame = +3
Query: 645 GTDLLLPCRVFSYAKTQVYWQYGDN-----NLVYETFGRIRVLPSG---DLYIXGLKWSD 800
G L C V V W G + Y + V P G L I + SD
Sbjct: 822 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 881
Query: 801 MGNYTCVAKNIYGKD 845
G Y C A N+YG+D
Sbjct: 882 SGAYFCQASNLYGRD 896
Score = 27.5 bits (58), Expect = 0.17
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 645 GTDLLLPCRVFSYAKTQVY---WQYGDNNLVYETF---GRIRVLPSGDLYIXGLKWSD-M 803
G +L C V S+ K V W + +Y + G+ +LP+G+L + L++SD +
Sbjct: 145 GCTAVLRCVVPSFVKDLVRVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHSLEFSDQI 204
Query: 804 GNYTC 818
Y C
Sbjct: 205 HGYRC 209
Score = 26.2 bits (55), Expect = 0.40
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 PPDTVHHTTGSQLELECLIIGKPAPIVEW-LKNGEPIEE 386
PP V + S L+C G P ++W +G P+ +
Sbjct: 36 PPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPVND 74
Score = 25.8 bits (54), Expect = 0.53
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +3
Query: 270 APPDTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVS 449
AP V G L C + G V WLK G+ IE V + + +++
Sbjct: 812 APSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGK-IELNPSTNYRVTVKREVTPDGVIA 870
Query: 450 KLVV--VAPTDGDRYTCAASAGLKRD 521
+L + +D Y C AS RD
Sbjct: 871 QLQISSAEASDSGAYFCQASNLYGRD 896
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 798 DMGNYTCVAKNIYGKDT 848
D G Y+C+A+N GK T
Sbjct: 493 DGGEYSCMAENRAGKVT 509
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 771 LYIXGLKWSDMGNYTCVAKN 830
L I L G+YTCVA N
Sbjct: 674 LSITNLAAEHSGDYTCVAAN 693
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 40.3 bits (90), Expect = 2e-05
Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 4/184 (2%)
Frame = +3
Query: 300 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEE-ATNEVILTDPESFAKIVSKLVVVAPTD 476
G + L+C G P P V W +G + + + + + + V+V D
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVHGDVISHVNISHVMVE--D 493
Query: 477 GDRYTCAAS--AGLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIGT 650
G Y+C A AG +A VY + + P +T AV G
Sbjct: 494 GGEYSCMAENRAGKVTHAARLNVY------------GLPYIRLIPKVT----AV---AGE 534
Query: 651 DLLLPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSGDLYIXGL-KWSDMGNYTCVAK 827
L L C V Y ++ W+ + L + R +VLP G L I + K D G YTC A+
Sbjct: 535 TLRLKCPVAGYPIEEIKWERANRELPDDL--RQKVLPDGTLVITSVQKKGDAGVYTCSAR 592
Query: 828 NIYG 839
N G
Sbjct: 593 NKQG 596
Score = 37.9 bits (84), Expect = 1e-04
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 702 WQYGDNNLVYETFGR-IRVLPSGDLYIXGLKWSDMGNYTCVAKNIYGKD 845
W G + R I++LPSG+L + L+ D G+YTC +N G D
Sbjct: 1341 WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDYTCQVENAQGND 1389
Score = 30.7 bits (66), Expect = 0.019
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Frame = +3
Query: 645 GTDLLLPCRVFSYAKTQVYWQYGDN-----NLVYETFGRIRVLPSG---DLYIXGLKWSD 800
G L C V V W G + Y + V P G L I + SD
Sbjct: 818 GDTATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASD 877
Query: 801 MGNYTCVAKNIYGKD 845
G Y C A N+YG+D
Sbjct: 878 SGAYFCQASNLYGRD 892
Score = 27.5 bits (58), Expect = 0.17
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 645 GTDLLLPCRVFSYAKTQVY---WQYGDNNLVYETF---GRIRVLPSGDLYIXGLKWSD-M 803
G +L C V S+ K V W + +Y + G+ +LP+G+L + L++SD +
Sbjct: 145 GCTAVLRCVVPSFVKDLVRVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHSLEFSDQI 204
Query: 804 GNYTC 818
Y C
Sbjct: 205 HGYRC 209
Score = 26.2 bits (55), Expect = 0.40
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 PPDTVHHTTGSQLELECLIIGKPAPIVEW-LKNGEPIEE 386
PP V + S L+C G P ++W +G P+ +
Sbjct: 36 PPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPVND 74
Score = 25.8 bits (54), Expect = 0.53
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +3
Query: 270 APPDTVHHTTGSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVS 449
AP V G L C + G V WLK G+ IE V + + +++
Sbjct: 808 APSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGK-IELNPSTNYRVTVKREVTPDGVIA 866
Query: 450 KLVV--VAPTDGDRYTCAASAGLKRD 521
+L + +D Y C AS RD
Sbjct: 867 QLQISSAEASDSGAYFCQASNLYGRD 892
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 771 LYIXGLKWSDMGNYTCVAKNI 833
L I L GNY+CVA+N+
Sbjct: 670 LMIEHLSPDHNGNYSCVARNL 690
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 798 DMGNYTCVAKNIYGKDT 848
D G Y+C+A+N GK T
Sbjct: 493 DGGEYSCMAENRAGKVT 509
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 35.9 bits (79), Expect = 5e-04
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 306 QLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVSKLVVVAPTDGDR 485
+ + C + G+P P V+WLKN E + + ++I + K++ K V A T
Sbjct: 418 EANIRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLI----GNGTKLIIKNVDYADTGA-- 471
Query: 486 YTCAASA--GLKRDSATTTV 539
Y C AS+ G+ RD ++ V
Sbjct: 472 YMCQASSIGGITRDISSLVV 491
Score = 33.5 bits (73), Expect = 0.003
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 1/181 (0%)
Frame = +3
Query: 300 GSQLELECLIIGKPAPIVEWLKNGEPIEEYEEATNEVILTDPESFAKIVSKLVVVAPTDG 479
G +E++C + G P P + W +NG +E E V D + L V
Sbjct: 325 GDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRV-FNDGSLY------LTKVQLIHA 377
Query: 480 DRYTCAASAGLKRDSATTTVYTXXXXXXXXXXXXXXFKPIKPTITLHYSAVFQNIGTDLL 659
YTC A +D T V T +K +T + A + + +
Sbjct: 378 GNYTCHAVR--NQDVVQTHVLT-----------IHTIPEVK--VTPRFQA--KRLKEEAN 420
Query: 660 LPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSG-DLYIXGLKWSDMGNYTCVAKNIY 836
+ C V +V W D L ++ + ++ +G L I + ++D G Y C A +I
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYMCQASSIG 480
Query: 837 G 839
G
Sbjct: 481 G 481
Score = 32.7 bits (71), Expect = 0.005
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +3
Query: 612 TLHYSAVFQNIGTDLLLPCRVFSYAKTQVYWQYGDNNLVYETFGRIRVLPSGDLYIXGLK 791
+L + + +G ++ + C V + W+ +L IRV G LY+ ++
Sbjct: 314 SLEVNHISARVGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKVQ 373
Query: 792 WSDMGNYTCVA 824
GNYTC A
Sbjct: 374 LIHAGNYTCHA 384
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 29.1 bits (62), Expect = 0.057
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 246 KNFAHISQAPPDTVHHTTGSQLELECLIIGKPAPIVEWLKNG 371
K+ A I +A + + G ++ C+ G P P + WLK+G
Sbjct: 19 KDGARIVKASHFELDYMLGRKITFFCMATGFPRPEITWLKDG 60
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 279 DTVHHTTGSQLELECLIIGKPAPI 350
D V H +GS+ E E + I P I
Sbjct: 179 DVVQHQSGSEAEAEFVCIATPEAI 202
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 336 SL*SDIPALIASQWYDARCR 277
SL ++ L+ QWYD R R
Sbjct: 104 SLKYEVEFLLQQQWYDPRLR 123
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 336 SL*SDIPALIASQWYDARCR 277
SL ++ L+ QWYD R R
Sbjct: 104 SLKYEVEFLLQQQWYDPRLR 123
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 336 SL*SDIPALIASQWYDARCR 277
SL ++ L+ QWYD R R
Sbjct: 155 SLKYEVEFLLQQQWYDPRLR 174
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 336 SL*SDIPALIASQWYDARCR 277
SL ++ L+ QWYD R R
Sbjct: 104 SLKYEVEFLLQQQWYDPRLR 123
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 31 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 79
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.9
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 332 RETSADRRMAEERGTDRGIRRGN*--RSHPDRPGELRQDRQQAGRGRSH 472
RE ++ RR + R ++ + R + + E +DR++ GR R H
Sbjct: 280 RERTSRRRYSRSREREQKSYKNEREYREYRETSRERSRDRRERGRSREH 328
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 739 LAG*ECCRPGTCTSXASS 792
L G E C+ G CT SS
Sbjct: 116 LVGKEACKQGVCTVEVSS 133
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 739 LAG*ECCRPGTCTSXASS 792
L G E C+ G CT SS
Sbjct: 116 LVGKEACKQGVCTVEVSS 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,739
Number of Sequences: 438
Number of extensions: 5314
Number of successful extensions: 66
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -