Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_K19
         (812 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0495 + 3722319-3722517,3723325-3723482,3723652-3723929,372...    32   0.47 
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631...    31   1.1  
03_01_0278 + 2136522-2137286                                           30   1.9  
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296     29   3.3  
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762...    29   5.8  
01_01_0839 - 6540971-6541978,6542076-6542240,6542330-6542419,654...    28   7.7  

>07_01_0495 +
           3722319-3722517,3723325-3723482,3723652-3723929,
           3723946-3724474
          Length = 387

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 290 LDGASRDI--C*EPRHWSCTAHCVCKPGGYQIIC 385
           LD    DI  C  P+ + C  +C+  PGGY  +C
Sbjct: 61  LDDGCTDINECLHPKEYGCYGNCMNTPGGYTCVC 94


>11_04_0205 +
           14860857-14861534,14862585-14862975,14863069-14863170,
           14863438-14863682
          Length = 471

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 463 GPPA-VLFYRPGPDPTAKQLFPNKIFDFENAISF 561
           GP A ++FYR GP P  K      ++D+E+ I+F
Sbjct: 248 GPRAGMIFYRKGPKPPKKGQPEGAVYDYEDKINF 281


>03_01_0278 + 2136522-2137286
          Length = 254

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +3

Query: 294 MALAVISVKNLAIGV-VLLIVSVSQAVTRLFAATTAPSPLVLHPR 425
           +A A  S   +A+GV +LL++S S+A+  L AAT+A +  +  PR
Sbjct: 8   LAAAATSALGVAVGVRLLLVLSRSRALKPLAAATSAAAAALKTPR 52


>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
          Length = 247

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = +2

Query: 167 GTSRYSKQ---RCRRRSYFRSQCPQAVVLHIPPSHVHIGSDLNTLDGASRDIC*EPRHW- 334
           G SR+       C+R  +F   CP   + H      HI ++ ++ D      C EP H  
Sbjct: 32  GPSRFPNDLCNNCKRPGHFARDCPNVALCHACGLPGHIAAECSSKDLCWN--CKEPGHMA 89

Query: 335 -SCTAHCVCKPGG 370
            SC    +C+  G
Sbjct: 90  NSCPNEGICRNCG 102


>08_02_1159 +
           24773328-24773994,24775430-24775558,24776080-24776220,
           24777393-24777487,24777545-24778606
          Length = 697

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +2

Query: 290 LDGASRDI--C*EPRHWSCTAHCVCKPGGYQIICGH 391
           +DG  RDI  C  P  + C   C    GGY   C H
Sbjct: 217 VDGGCRDIDECKSPHIYPCYGDCKNTRGGYDCQCHH 252


>01_01_0839 -
           6540971-6541978,6542076-6542240,6542330-6542419,
           6542536-6542736,6542886-6543098,6543216-6543461
          Length = 640

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -1

Query: 548 FSKSNILFGNSCFAVGSGPGR*KRTAGGPWGRYGWSRKELST 423
           + ++  +F  SC   G G G   RT GG     GW+  +  T
Sbjct: 322 YQRNADVFACSCLGKGGGGGNVGRTPGGLMYHQGWNNLQFVT 363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,481,739
Number of Sequences: 37544
Number of extensions: 401355
Number of successful extensions: 1098
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)