Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_K18
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   0.92 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.6  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 80  KMFVTRQIASRFFQQTVRRYHGESHFKPPTM 172
           K  +T  IA  + Q    RY G  HF  PT+
Sbjct: 8   KKHITEIIADIYRQFPTDRYVGYYHFMTPTL 38


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = -3

Query: 100 LACYEHFYCS---ALCVVSFIH-FVSRSTHY 20
           L C  +FYC+    LC+  F   F+   TH+
Sbjct: 282 LLCIYYFYCALIILLCIYYFCRAFIIFPTHF 312


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 120 WKNLDAIWRVTNIFI 76
           W+ L A+W   ++FI
Sbjct: 98  WEQLRAVWDPDDVFI 112


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 149 SHFKPPTMDELPVPKGSWQSHHDANQRRFN 238
           +H +   +  LP P  S   HH  N +  N
Sbjct: 240 THHQGQLVVGLPAPTSSIMMHHLVNPQSLN 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,822
Number of Sequences: 336
Number of extensions: 1881
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)