Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_K18
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      24   2.6  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   4.6  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   6.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.1  

>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 91 YEHFYCSALCVVSFI 47
          YE +YC+  C++SF+
Sbjct: 42 YEAWYCAGECMISFL 56


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 144 PW*RRTVCWKNLDAIW 97
           PW  RT+CW    AIW
Sbjct: 267 PW-CRTMCWIRSGAIW 281


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 137 YHGESHFKPPTMDELPVPKGSWQSHHDANQ 226
           YH  S F+    +E+    G   SH+ +NQ
Sbjct: 397 YHNASAFQQMPKEEIKNEPGDSPSHNPSNQ 426


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +2

Query: 290 KTSGLVYLNY---SPPKSLD*AFTNNKSLDLC 376
           K +GLV LN+   S  + LD  + NN +  LC
Sbjct: 268 KFNGLVQLNHINNSHGRMLDLLYANNAAAKLC 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,445
Number of Sequences: 2352
Number of extensions: 8056
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)