Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_K09
         (402 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical ...   178   1e-45
L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical pr...    32   0.18 
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un...    27   5.0  
AF016655-4|AAY55854.1|  144|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    26   8.8  

>AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical
           protein Y106G6H.3 protein.
          Length = 113

 Score =  178 bits (434), Expect = 1e-45
 Identities = 82/112 (73%), Positives = 96/112 (85%)
 Frame = +1

Query: 10  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 189
           M  A K +K  E+INSRL++VMK+G+Y LGYKQTLK+L  GKAKLVIIA N PPLRKSEI
Sbjct: 1   MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEI 60

Query: 190 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAS 345
           EYYA+LAKTGVHHY+GNNIELGTACG+ +RVCTLA+TD GDSDII ++P  S
Sbjct: 61  EYYAMLAKTGVHHYNGNNIELGTACGRLFRVCTLAVTDAGDSDIILSVPSES 112


>L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical
           protein ZK686.1 protein.
          Length = 44

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +1

Query: 67  LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 162
           +VMK+G+Y L Y+Q LK+L    AKLVI  K+
Sbjct: 1   MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31


>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 6 protein.
          Length = 2098

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 193 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSD 318
           +Y LLA  G+     + +ELGTA   YY +    +T  G  D
Sbjct: 252 FYCLLA--GLSREEKSELELGTAADYYYLIQGKTLTAEGRDD 291


>AF016655-4|AAY55854.1|  144|Caenorhabditis elegans Hypothetical
           protein C17F4.11 protein.
          Length = 144

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 112 LKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKT-GVHHYSGNNIELGTACGKYYRVCT 288
           L+T       L II     P+    +  Y +  KT GV HY GN  +L +   K+ R   
Sbjct: 15  LRTYENSNQLLQIIVNARKPVL---VFGYPVSNKTKGVVHYEGNEFDLRSFLKKFNRQME 71

Query: 289 LAITDPGDSDIITTLPEA 342
           +   +   +D + TL  A
Sbjct: 72  IFFKESESNDWLFTLYNA 89


>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 145 PALLCLVEEFSKFACILSNIFPISSP 68
           PAL    EEFSKF  +L  I+P   P
Sbjct: 290 PALNLDSEEFSKFVTLLYAIYPAIDP 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.314    0.129    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,299,988
Number of Sequences: 27780
Number of extensions: 152196
Number of successful extensions: 279
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)