Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_K05
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 35 0.053
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 34 0.093
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 34 0.093
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 34 0.093
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 34 0.093
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 34 0.093
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 32 0.11
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 34 0.12
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 33 0.16
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 33 0.16
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 33 0.21
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 33 0.21
Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 32 0.50
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 31 0.66
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 31 0.66
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 31 0.66
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 31 0.66
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 31 0.87
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 31 0.87
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 31 0.87
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 31 0.87
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 31 0.87
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 31 0.87
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 31 0.87
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 31 0.87
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 31 0.87
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 30 1.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 1.5
U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protei... 30 1.5
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 30 2.0
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 30 2.0
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 30 2.0
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen prot... 29 2.6
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.5
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.5
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 3.5
Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 29 4.6
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 29 4.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical pr... 28 6.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 6.1
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 28 6.1
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 6.1
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 6.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 6.1
AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen prot... 28 6.1
Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 28 8.1
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 28 8.1
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 28 8.1
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 28 8.1
AL034365-8|CAA22260.2| 364|Caenorhabditis elegans Hypothetical ... 28 8.1
AF000264-12|AAK70648.2| 467|Caenorhabditis elegans Hypothetical... 28 8.1
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 28 8.1
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
DAG GE G G PGPPG ++ E G +R + PA P P
Sbjct: 129 DAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP 182
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
DAG GE G G PGPPG ++ E G +R + PA P P
Sbjct: 129 DAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP 182
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 242
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 302
G KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 417 GPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 469
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G KGD G PGPPG+
Sbjct: 759 GLPGMKGDSGLPGPPGL 775
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 117 PDFISCKIDAGLKGEKGDRGHPGPPG 194
P K D+GL G G GHPG PG
Sbjct: 758 PGLPGMKGDSGLPGPPGLPGHPGVPG 783
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
G G+KG+ G+PG PG+
Sbjct: 1180 GYPGQKGENGYPGQPGL 1196
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G++G+ G+PG PG+
Sbjct: 1475 GLPGQRGNDGYPGAPGL 1491
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 242
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 302
G KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 416 GPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 468
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G KGD G PGPPG+
Sbjct: 758 GLPGMKGDSGLPGPPGL 774
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 117 PDFISCKIDAGLKGEKGDRGHPGPPG 194
P K D+GL G G GHPG PG
Sbjct: 757 PGLPGMKGDSGLPGPPGLPGHPGVPG 782
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
G G+KG+ G+PG PG+
Sbjct: 1179 GYPGQKGENGYPGQPGL 1195
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G++G+ G+PG PG+
Sbjct: 1474 GLPGQRGNDGYPGAPGL 1490
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 242
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 302
G KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 416 GPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 468
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G KGD G PGPPG+
Sbjct: 758 GLPGMKGDSGLPGPPGL 774
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 117 PDFISCKIDAGLKGEKGDRGHPGPPG 194
P K D+GL G G GHPG PG
Sbjct: 757 PGLPGMKGDSGLPGPPGLPGHPGVPG 782
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
G G+KG+ G+PG PG+
Sbjct: 1179 GYPGQKGENGYPGQPGL 1195
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G++G+ G+PG PG+
Sbjct: 1474 GLPGQRGNDGYPGAPGL 1490
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 242
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 302
G KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 417 GPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 469
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G KGD G PGPPG+
Sbjct: 759 GLPGMKGDSGLPGPPGL 775
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 117 PDFISCKIDAGLKGEKGDRGHPGPPG 194
P K D+GL G G GHPG PG
Sbjct: 758 PGLPGMKGDSGLPGPPGLPGHPGVPG 783
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
G G+KG+ G+PG PG+
Sbjct: 1180 GYPGQKGENGYPGQPGL 1196
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G++G+ G+PG PG+
Sbjct: 1475 GLPGQRGNDGYPGAPGL 1491
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 34.3 bits (75), Expect = 0.093
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGD 242
AG GEKGD G PG PG+ D E+GD
Sbjct: 163 AGAPGEKGDGGMPGMPGLPGPSGRDGYPGEKGD 195
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK-TTCSNVPASDPKP 302
G KG+KGD G PG PG+ +G+ R + + +P D KP
Sbjct: 453 GPKGDKGDGGIPGAPGVSGPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKP 505
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G KGD G PGPPG+
Sbjct: 795 GLPGMKGDSGLPGPPGL 811
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 117 PDFISCKIDAGLKGEKGDRGHPGPPG 194
P K D+GL G G GHPG PG
Sbjct: 794 PGLPGMKGDSGLPGPPGLPGHPGVPG 819
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 147 GLKGEKGDRGH---PGPPGICECKPTDNSENERGDSASRPSKTTCSNV-PASDPKP 302
G KG+ GD G PGPPG E + + RG+ + K + PA P P
Sbjct: 223 GPKGDPGDLGSVGPPGPPGPREFTGSGSIVGPRGNPGEKGDKGDIGAMGPAGPPGP 278
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
G G+KG+ G+PG PG+
Sbjct: 1216 GYPGQKGENGYPGQPGL 1232
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G++G+ G+PG PG+
Sbjct: 1511 GLPGQRGNDGYPGAPGL 1527
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPG 194
AGL GE+GD G PGP G
Sbjct: 237 AGLDGERGDEGEPGPEG 253
Score = 29.9 bits (64), Expect(2) = 0.11
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 99 SLAQSGPDFISCKIDA----GLKGEKGDRGHPGPPGI 197
SL P I C + G GE G++G PGPPG+
Sbjct: 119 SLIYQRPPCIRCPVGEPGPPGPDGEPGEQGPPGPPGV 155
Score = 23.0 bits (47), Expect(2) = 0.11
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 174 GHPGPPGICECKPTD-NSENERGD 242
GH GPPG+ E +P D + E G+
Sbjct: 161 GHDGPPGV-EGEPGDAGDQGEDGE 183
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
DAG+ GE G RG PGPPG
Sbjct: 239 DAGVAGEPGQRGPPGPPG 256
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +3
Query: 99 SLAQSGPDFISCKID----AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKT 266
S A + P+ KID AG KGE G G PG G D ++ +AS+ +
Sbjct: 87 SPAATAPEASPVKIDDSCPAGPKGESGSAGEPGTDGTDGTPGKDGADGSNEQTASQ-AGD 145
Query: 267 TCSNVPASDP 296
C+ PA P
Sbjct: 146 LCTACPAGPP 155
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 117 PDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERG 239
P K G +GEKGD+G PG G D E + G
Sbjct: 155 PGVAGYKGKRGPRGEKGDKGAPGNAGRDGAPGDDGPEGDHG 195
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENE 233
G G +GD GHPGP G K T ++ +
Sbjct: 186 GDDGPEGDHGHPGPMGPAGEKGTSGADGK 214
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
+AG +G G+ G PGPPG S+ E G ++ + PA P P
Sbjct: 166 EAGAEGPAGEAGPPGPPGPDGKPGAAGSDGEAGAPGTKTTNAPGEPGPAGPPGP 219
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENEL 326
GL+GE G+ G PG PG E E+G P + + D +P GEN L
Sbjct: 877 GLEGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGL 935
Query: 327 E 329
+
Sbjct: 936 D 936
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
D G KG +GDRG PG PG
Sbjct: 86 DMGSKGARGDRGLPGSPG 103
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPG 194
+G+KGEKG G PGPPG
Sbjct: 223 SGVKGEKGLPGPPGPPG 239
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGI 197
AG+KGEKG G GPPG+
Sbjct: 263 AGVKGEKGRDGPVGPPGM 280
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 317
GL+GE GD G PG G C + + + G +P +D +P ++GE
Sbjct: 704 GLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEH-GTDGLPGLPGADGQPGFVGE 759
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENEL 326
GL+GE G+ G PG PG E E+G P + + D +P GEN L
Sbjct: 1134 GLEGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGL 1192
Query: 327 E 329
+
Sbjct: 1193 D 1193
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
D G KG +GDRG PG PG
Sbjct: 86 DMGSKGARGDRGLPGSPG 103
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPG 194
+G+KGEKG G PGPPG
Sbjct: 223 SGVKGEKGLPGPPGPPG 239
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGI 197
AG+KGEKG G GPPG+
Sbjct: 263 AGVKGEKGRDGPVGPPGM 280
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 317
GL+GE GD G PG G C + + + G +P +D +P ++GE
Sbjct: 961 GLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEH-GTDGLPGLPGADGQPGFVGE 1016
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENEL 326
GL+GE G+ G PG PG E E+G P + + D +P GEN L
Sbjct: 1133 GLEGECGEDGFPGSPGQPGYPGQQGREGEKG-YPGIPGENGLPGLRGQDGQPGLKGENGL 1191
Query: 327 E 329
+
Sbjct: 1192 D 1192
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
D G KG +GDRG PG PG
Sbjct: 86 DMGSKGARGDRGLPGSPG 103
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPG 194
+G+KGEKG G PGPPG
Sbjct: 223 SGVKGEKGLPGPPGPPG 239
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGI 197
AG+KGEKG G GPPG+
Sbjct: 263 AGVKGEKGRDGPVGPPGM 280
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 317
GL+GE GD G PG G C + + + G +P +D +P ++GE
Sbjct: 960 GLRGEHGDNGLPGLEGECGEEGSRGLDGVPGYPGEH-GTDGLPGLPGADGQPGFVGE 1015
>Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical
protein M199.5 protein.
Length = 660
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
K D G KGEKG G PG G K D + +GD + +K
Sbjct: 162 KGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAK 204
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSA--SRPSKTTCSNVPASDPKPQWMGEN 320
G KG+KGD+G GP G T S+ ++G+ +P + D +P G++
Sbjct: 499 GSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQD 558
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
G KG+KG++G GP G T ++ ++GD + +K
Sbjct: 295 GQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAK 333
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASR 254
K D G G+KGD+G G G K D ++GD +
Sbjct: 531 KGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKGDKGDK 570
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
G GEKG G G PG K D + ++G S + K
Sbjct: 118 GPPGEKGKDGDKGAPGAKGSKGDDGKKGDKGSSGEKGEK 156
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 108 QSGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
+ P K D G KG+KG G G G K + E+G + S SK
Sbjct: 129 KGAPGAKGSKGDDGKKGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSK 180
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE 317
G KG+KG++G G PG K D ++ G S+ K + +D P G+
Sbjct: 178 GSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGS-DGAKGADGNPGSKGD 233
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
G KG+KG++G GP G T ++ ++G+ + +K
Sbjct: 391 GAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAK 429
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPK 299
K + GL G KGD+G G PG K ++ +G + SK + PK
Sbjct: 459 KGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPK 513
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
K + GL G KGD+G G PG K ++ +G + SK
Sbjct: 300 KGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSK 342
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
K + GL G KGD+G G PG K ++ +G + SK
Sbjct: 396 KGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSK 438
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
G KG+KG++G GP G T ++ ++G+ + +K
Sbjct: 454 GQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAK 492
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
G KGEKGD G PG G K D ++G K
Sbjct: 594 GDKGEKGDIGQPGQKGDKGDKGQDGQPGQKGQDGQPGQK 632
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSN 278
K D G GEKG++G PG G K S G + K N
Sbjct: 144 KGDKGSSGEKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGN 191
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
G KGEKGD G PG G K D ++G K
Sbjct: 526 GDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQK 564
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGIC-ECKPTDNSENERGDSASRPSKTTCSNVPASDP 296
GL G +G +G PG PG C C+ + +E A P + P S P
Sbjct: 254 GLPGPQGPKGEPGNPGTCHHCQNRAPAPSEAPGKAPPPPQDYTRPAPESYP 304
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDN 221
G +G G +G PG PG+C C+ D+
Sbjct: 270 GPEGPMGGQGPPGEPGVCVCQNVDS 294
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERG 239
G G GD G PGPPG+ D + E G
Sbjct: 164 GWPGFPGDVGPPGPPGLKGIDGEDGAPGETG 194
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDN 221
G +G G +G PG PG+C C+ D+
Sbjct: 307 GPEGPMGGQGPPGEPGVCVCQNVDS 331
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERG 239
G G GD G PGPPG+ D + E G
Sbjct: 201 GWPGFPGDVGPPGPPGLKGIDGEDGAPGETG 231
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDN 221
G +G G +G PG PG+C C+ D+
Sbjct: 291 GPEGPMGGQGPPGEPGVCVCQNVDS 315
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERG 239
G G GD G PGPPG+ D + E G
Sbjct: 185 GWPGFPGDVGPPGPPGLKGIDGEDGAPGETG 215
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSA--SRPSKTTCSNVPASDPKP 302
AG GEKG G+PG PG D GD P+ C PA P P
Sbjct: 97 AGPPGEKGSLGNPGQPG---PDGVDGDNGVDGDVVIHDMPNPKECIKCPAGPPGP 148
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 740 GLHGSRGDQGLPGPPGM 756
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 860 KGEKGERGAPGAPG 873
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 343 GLHGSRGDQGLPGPPGM 359
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 703 GLHGSRGDQGLPGPPGM 719
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 823 KGEKGERGAPGAPG 836
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 215 GLHGSRGDQGLPGPPGM 231
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 335 KGEKGERGAPGAPG 348
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 740 GLHGSRGDQGLPGPPGM 756
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 860 KGEKGERGAPGAPG 873
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 343 GLHGSRGDQGLPGPPGM 359
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 703 GLHGSRGDQGLPGPPGM 719
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 823 KGEKGERGAPGAPG 836
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 305
G G G++G G PG C C+ T+ N+ P +PQ
Sbjct: 286 GPNGPTGEQGPSGTPGTCVCQDTEVVMNDEKGRVPAPRDNVAPGATGGSYEPQ 338
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSN 278
AG GEKG G PG PG + E+G S + P C +
Sbjct: 264 AGTPGEKGWPGPPGAPGPGGMPGPNGPTGEQGPSGT-PGTCVCQD 307
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 135 KIDAGLKGEKGDRGHPGPPG 194
K AG +G +GD G PGPPG
Sbjct: 144 KCPAGPRGPRGDAGPPGPPG 163
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 305
G G G++G G PG C C+ T+ N+ P +PQ
Sbjct: 286 GPNGPTGEQGPSGTPGTCVCQDTEVVMNDEKGRVPAPRDNVAPGATGGSYEPQ 338
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSN 278
AG GEKG G PG PG + E+G S + P C +
Sbjct: 264 AGTPGEKGWPGPPGAPGPGGMPGPNGPTGEQGPSGT-PGTCVCQD 307
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 215 GLHGSRGDQGLPGPPGM 231
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 335 KGEKGERGAPGAPG 348
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 343 GLHGSRGDQGLPGPPGM 359
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 463 KGEKGERGAPGAPG 476
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
GL G +GD+G PGPPG+
Sbjct: 682 GLHGSRGDQGLPGPPGM 698
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 153 KGEKGDRGHPGPPG 194
KGEKG+RG PG PG
Sbjct: 802 KGEKGERGAPGAPG 815
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPP-GICECKPTDNS 224
GL+G G RG PG G C+C P + S
Sbjct: 272 GLRGVPGRRGSPGKDGGYCQCPPREGS 298
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPG 194
GL+GE G+ G PG PG
Sbjct: 166 GLRGEAGEPGRPGTPG 181
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
DAG G+ G G PGPPG + E+G + P K + P P P
Sbjct: 178 DAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPT-GEPGK-VINGAPPGPPGP 229
>U21318-2|AAC46668.1| 285|Caenorhabditis elegans Collagen protein
75 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPG 194
G +G GDRG PGPPG
Sbjct: 235 GYEGAYGDRGEPGPPG 250
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 141 DAGL-KGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQ 305
DAG + GD G P PP K G TT N + DPKP+
Sbjct: 52 DAGNPNSQAGDSGKPNPPAGDPTKLKPGGGGPAGKPGPNAGDTTKPNSQSGDPKPR 107
>Z69662-1|CAA93499.1| 359|Caenorhabditis elegans Hypothetical
protein F56D5.1 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
+AG KG+ G GHPG PG
Sbjct: 159 NAGRKGKSGKSGHPGQPG 176
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPGICECKPTDNSE 227
D GL G+ G G+PG PG+ K + E
Sbjct: 103 DRGLDGQPGGAGNPGQPGVAGPKSHEQQE 131
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPT--DNSENERGDSASRPSKTTCSNVPASDPKP 302
G G GD+G GPPG PT E+GD A RP C P +P
Sbjct: 153 GPAGPAGDQGRHGPPG-----PTGGQGGPGEQGD-AGRPGAAGCPGPPGPRGEP 200
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 156 GEKGDRGHPGPPGICECKPTDNSENERGDSASRPS-KTTCSNVPASDPKP 302
G KG+ G PG GI + E+GD+A + S+ AS P P
Sbjct: 213 GPKGETGSPGRDGIPGARGPPGERGEKGDTAFLSTYPRVASSSTASSPGP 262
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGI 197
G GE+GDRG GPPG+
Sbjct: 446 GHSGERGDRGDIGPPGL 462
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 129 SCKIDAGLKGEKGDRGHPGPPGI 197
SC AG GE+G G PG PG+
Sbjct: 26 SCMCPAGPPGERGPVGPPGLPGL 48
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPG 194
G KG++G+RG GPPG
Sbjct: 126 GSKGDRGERGPLGPPG 141
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 108 QSGPDFISCKIDA-GLKGEKGDRGHPGPPGI--CECKPTDNSENERGDSASRPSKTTCSN 278
Q G D S + A G+ G +GD G PG PG + +P N RG + P +
Sbjct: 157 QPGQDGASGQPGAPGVAGPQGDAGTPGQPGQQGQDGRPGQNGRRGRG-TPGAPGAPGAAG 215
Query: 279 VPASDPKP 302
P ++ +P
Sbjct: 216 APGNNGQP 223
>Z71262-8|CAA95812.1| 302|Caenorhabditis elegans Hypothetical
protein F22D6.10 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSK 263
+ G K RG PGPPG TD + G + PS+
Sbjct: 87 NCGAKASNCPRGPPGPPGEPGENGTDGQAGQDGQDGNTPSE 127
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Frame = +3
Query: 159 EKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE----NEL 326
EK + P P K + E+GD + PS+ + +P E N
Sbjct: 107 EKRSKDGPAEPKKTPAKKKTEEKEEKGDVEATPSRKRKNEETLKSKRPTEFNEESDFNSF 166
Query: 327 ESFKIECDEAENMTCIAHETFSQKSILVKKNFTMQKQSFWWSTF 458
F C + ++ + ++ S+L KKNF W TF
Sbjct: 167 YKFVKVCSVLKEISVKSEKSAVITSLLQKKNF--DGDLMLWLTF 208
>AF039720-3|AAB96697.1| 281|Caenorhabditis elegans Collagen protein
54 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +3
Query: 156 GEKGDRGHPGPPGICECKPTDNSENERGDS-ASRPSKTTCSNVPASDPKPQ 305
GE G G PG PG + G S K C PA +P PQ
Sbjct: 90 GEAGPPGAPGTPGADGEAGNPGKDGAAGSSLVFEDEKLPCIKCPAGEPGPQ 140
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
DAG G+ G GHPG PG
Sbjct: 174 DAGAPGQAGAPGHPGAPG 191
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 141 DAGLKGEKGDRGHPGPPG 194
DAG G+ G GHPG PG
Sbjct: 174 DAGAPGQAGAPGHPGAPG 191
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
GL G++GD+G G PG + +G + + P K P + P
Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGA-PGKPGAPGAPGDEGLP 210
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
GL G++GD+G G PG + +G + + P K P + P
Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGA-PGKPGAPGAPGDEGLP 210
>Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical
protein D2023.7 protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 105 AQSGPDFISCKIDA-GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNV 281
+Q+ P F C A G G G+RG PG G+ + T S G RP +
Sbjct: 142 SQNAP-FNGCITCAPGKPGSPGERGKPGLRGMRGPRGTGGSPGTDG-YPGRPGEMGPPGP 199
Query: 282 PASDPKPQWMGE 317
P D KP GE
Sbjct: 200 PGDDGKPGSNGE 211
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +1
Query: 106 LRVARILSVVKSMLD*KERKATEDIPVPLEFASVNQQIIQRMKEEIRQVDLRKQPVAMCR 285
L++A + +SM + + ++ E IP L ++NQ+ ++ EE+R+ D R Q R
Sbjct: 563 LKIADDRLLAESMQE-RRKQTFELIPSELVLGNLNQEDDKKRLEELREED-RAQKRFAYR 620
Query: 286 PQIQSRSGWVRMNLNLSK*NVMKQK 360
I SR NL++ VM ++
Sbjct: 621 SAIDSRRISALQFANLARKRVMDRR 645
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 84 VYLSLSLAQSGPDFISC-KIDAGLKGEKGDRGHPGPPG 194
+Y +S + PD C G GEKGD+G G G
Sbjct: 67 IYQPVSAPTAAPDVSKCCTCSQGPSGEKGDKGSDGRDG 104
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
G G KG G PG PG+ N N + ++ ++ C P + P P
Sbjct: 93 GPTGPKGPDGGPGQPGLIGLNGR-NGRNGKYVASEAHNEPACQKCPVAPPGP 143
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPG 194
G++GE+G RG GPPG
Sbjct: 238 GVQGERGSRGARGPPG 253
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 147 GLKGEKGDRGHPGP---PGICECKPTDNSENERGDSASRPSKTT 269
G KG GD+G+PGP PG D S E+G P T
Sbjct: 280 GEKGAPGDQGNPGPYGKPGQPGAPGPDGSAGEKGGCDHCPPPRT 323
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = +3
Query: 213 TDNSENERGDSASRPSKTTCSNVPASDPKPQWMGE--NELESFKIE---CDEAENMTCIA 377
T+ +N + + +TT P +D QW + EL KIE CD A C+
Sbjct: 159 TNRMQNVQKHPETSLRRTT--RTPVADQIHQWKTQLSGELTKSKIEQKTCDAALYQVCLK 216
Query: 378 HETFSQKSILVKKN 419
H + SQ + +KN
Sbjct: 217 HVSCSQLWSMFRKN 230
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
AG G G G PG P I E T + E GDS P P +D P
Sbjct: 194 AGEAGAPGPAGEPGTPAISE-PLTPGAPGEPGDSGP-PGPPGPPGAPGNDGPP 244
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = +3
Query: 201 ECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENELESFKIECDEAENMTCIAH 380
E + T++S++ D + ++ +P S+P+ +LES + + +EN +
Sbjct: 1036 ETRNTNDSKDSFDDEVNPRNQRLVVEIPFSEPRVTSTATIQLESSDVAGENSENKRPVI- 1094
Query: 381 ETFSQKSILVKKNFTMQKQSF 443
+ KS + KK Q+ F
Sbjct: 1095 -SMRSKSEIAKKEKDAQRSGF 1114
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/81 (22%), Positives = 37/81 (45%)
Frame = +3
Query: 201 ECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENELESFKIECDEAENMTCIAH 380
E + T++S++ D + ++ +P S+P+ +LES + + +EN +
Sbjct: 1036 ETRNTNDSKDSFDDEVNPRNQRLVVEIPFSEPRVTSTATIQLESSDVAGENSENKRPVI- 1094
Query: 381 ETFSQKSILVKKNFTMQKQSF 443
+ KS + KK Q+ F
Sbjct: 1095 -SMRSKSEIAKKEKDAQRSGF 1114
>Z66498-1|CAA91290.1| 304|Caenorhabditis elegans Hypothetical
protein M195.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICE-CKP 212
AG GE+G+ G PG G C+ C P
Sbjct: 274 AGAAGEQGEAGQPGEGGGCDHCPP 297
>Z47356-3|CAA87416.1| 268|Caenorhabditis elegans Hypothetical
protein T15H9.3 protein.
Length = 268
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 187 PLEFASVNQQIIQRMKEEIRQVDLRKQPVAMCRPQIQ 297
PL+ A + QI +++ +I Q+ + QP + Q+Q
Sbjct: 85 PLQLAPIPTQIQSQLQPQISQIPIHNQPQIQIQSQVQ 121
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
AG G G G PG P I E T + E GDS P P +D P
Sbjct: 189 AGEAGAPGPAGEPGTPAISE-PLTPGAPGEPGDSGP-PGPPGPPGAPGNDGPP 239
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERG 239
GL GE G G PG PG+ P + +G
Sbjct: 118 GLDGEPGKSGEPGAPGLAGIAPPVTIDPTKG 148
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 QSGPDFI-SCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVP 284
Q+GPD G G KG G+PG PG + KP + + G + ++ K C
Sbjct: 234 QAGPDGQPGAPGGPGTPGSKGPPGNPGAPG-ADGKP--GAPGQAGPAGAKGEKGICPKYC 290
Query: 285 ASD 293
A D
Sbjct: 291 AID 293
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGIC--ECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMG 314
G G GD+G GPPG + P + + R +A RP P ++ +P G
Sbjct: 153 GPAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGRPGPPGPRGEPGTEYRPGQAG 210
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
AG G G G PG P I E T + E GDS P P +D P
Sbjct: 189 AGEAGAPGPAGEPGTPAISE-PLTPGAPGEPGDSGP-PGPPGPPGAPGNDGPP 239
>AF036699-4|AAB88358.1| 281|Caenorhabditis elegans Collagen protein
104 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTT 269
GL+G G GHPG PG + E GD S T
Sbjct: 163 GLRGPDGHPGHPGNPGYGGEPGAPGNNGEPGDKGRDGSHGT 203
>Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical
protein C01H6.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGEN 320
GL GE G G PG PG E+ + P + P SD KP G +
Sbjct: 161 GLPGEPGPNGKPGNPGY-------RGEDGKPGRPGEPGSSGLPGRPGSDGKPGLPGRD 211
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 153 KGEKGDRGHPGP---PGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKP 302
+G G GHPG PGI DN R A P C PA P P
Sbjct: 106 RGPPGPPGHPGQRGIPGIPGRNGQDNYNTIRA-PACPPRNQDCIKCPAGPPGP 157
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 111 SGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTT 269
SG K G GE G+ G PG PG P ++ ++ R RP K T
Sbjct: 182 SGTFLTGIKKLRGPPGEPGEPGRPGTPG----TPGNDGKDGRNGYRLRPDKIT 230
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +3
Query: 102 LAQSGPDFISCKIDAGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNV 281
+ + P + + + G +G GD G PGP G P +N R + P +T
Sbjct: 229 ITRGPPGPMGARGEPGHRGLPGDNGMPGPMG----PPGYRGDNGRRGAPGLPGRTGRHGK 284
Query: 282 PASD 293
P D
Sbjct: 285 PGGD 288
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 147 GLKGEKGDRGHPGPPG 194
G KG+KG+ GHPG G
Sbjct: 260 GPKGQKGETGHPGAQG 275
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 144 AGLKGEKGDRGHPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMG 314
AGL+G G G PG PG+ + KP ++ R S P +P KP G
Sbjct: 255 AGLEGPPGQSGLPGMPGL-QGKPGNDGYPGRDGS---PGDQGDDGIPGGPGKPGQKG 307
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 344
T + ++R + A PS SN S P P+W G +++ IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 344
T + ++R + A PS SN S P P+W G +++ IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 108 QSGPDFI-SCKIDAGLKGEKGDRGHPGPPGI 197
Q GPD +AG G+ GD+G GPPGI
Sbjct: 214 QPGPDGPPGAPGNAGEDGKPGDQGPRGPPGI 244
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 108 QSGPDFI-SCKIDAGLKGEKGDRGHPGPPGI 197
Q GPD +AG G+ GD+G GPPGI
Sbjct: 195 QPGPDGPPGAPGNAGEDGKPGDQGPRGPPGI 225
>AL034365-8|CAA22260.2| 364|Caenorhabditis elegans Hypothetical
protein Y69E1A.8 protein.
Length = 364
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 117 GHSEPMTNSNKLFANRATKPNLKTSIAQEIN 25
GH P N NK+F+ + N T+ E+N
Sbjct: 45 GHKRPFFNHNKVFSKVESNKNYGTATEHELN 75
>AF000264-12|AAK70648.2| 467|Caenorhabditis elegans Hypothetical
protein F43E2.1 protein.
Length = 467
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 561 LDIKASSPEIIQSIVQLLTWNDVAIGFYPTSKSLFHYG 674
L I +S II ++ +L W D+ + T LFH G
Sbjct: 213 LRIYPNSYSIILLLIHVLQWYDILPNLHQTHSDLFHRG 250
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 213 TDNSENERGDSASRPSKTTCSNVPASDPKPQWM-GENELESFKIE 344
T + ++R + A PS SN S P P+W G +++ IE
Sbjct: 138 TSPAPSKRENPADAPSDRVVSNAKLSQPGPEWFEGFEQMDMTDIE 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,085,203
Number of Sequences: 27780
Number of extensions: 372851
Number of successful extensions: 3358
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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