Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_K04
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 317 5e-87
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 317 5e-87
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 264 7e-71
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 182 3e-46
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 182 3e-46
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 182 3e-46
Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alph... 47 1e-05
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 40 0.002
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 40 0.002
Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical ... 39 0.004
AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta... 34 0.14
Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 33 0.25
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 31 0.75
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 31 1.00
AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical... 31 1.3
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 30 1.7
Z99710-12|CAI79158.1| 333|Caenorhabditis elegans Hypothetical p... 29 4.0
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 29 4.0
AL034393-28|CAI79175.1| 333|Caenorhabditis elegans Hypothetical... 29 4.0
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 29 4.0
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 29 4.0
AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical ... 29 4.0
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 29 5.3
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 29 5.3
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 29 5.3
L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome asse... 28 7.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 9.3
AJ249344-1|CAB77052.1| 449|Caenorhabditis elegans putative inte... 28 9.3
AF099913-1|AAC68756.1| 466|Caenorhabditis elegans Paralysed arr... 28 9.3
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 317 bits (779), Expect = 5e-87
Identities = 156/271 (57%), Positives = 194/271 (71%), Gaps = 2/271 (0%)
Frame = +3
Query: 15 AKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 194
+ NR +KN K+ + +RNE V +RK+KREE + KRRN+ D E
Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60
Query: 195 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 368
D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS
Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120
Query: 369 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIG 548
D P LQFE AWALTNIASGTS QT VV+AGAVP+FLQLL + NVC+Q+VWALGNIIG
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIG 179
Query: 549 DGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCRSKDPPPPLKTIQEILPA 728
DGP RD+ +ELG+++PLL I +IPI FLRNVTWVIVNLCR KDP P ++ ILPA
Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPA 239
Query: 729 LNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
L++LI H D+++L+DTVWA+ YLTDGGNE I
Sbjct: 240 LSLLIHHQDTNILIDTVWALSYLTDGGNEHI 270
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +3
Query: 300 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 479
N I +I A ++ LV L D +Q A+ NI +GT QT V+ +G +
Sbjct: 267 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 325
Query: 480 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 656
LL E + +AVW + NI V + G++ ++ L+ + D P + W
Sbjct: 326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 383
Query: 657 VIVNLCRSKDP 689
I N+ S P
Sbjct: 384 AISNVTISGRP 394
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/170 (20%), Positives = 61/170 (35%)
Frame = +3
Query: 312 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 491
D + GIL L+Q ++ W + N+ + V +P L+
Sbjct: 186 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 245
Query: 492 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNL 671
N+ VWAL + G VIE VV L+ L+ + + + N+
Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL-GHVDVKVQTAALRAVGNI 304
Query: 672 CRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
D L +L + L+ H + + VW + +T G +Q+
Sbjct: 305 VTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNITAGNQQQV 354
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 317 bits (779), Expect = 5e-87
Identities = 156/271 (57%), Positives = 194/271 (71%), Gaps = 2/271 (0%)
Frame = +3
Query: 15 AKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 194
+ NR +KN K+ + +RNE V +RK+KREE + KRRN+ D E
Sbjct: 2 SSNRQAYYKNNAKE-QIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPG 60
Query: 195 TTDLD--ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRA 368
D + L + AA + +P QL AVQQ RK+LS D+NPPID+LI +GILP+LVQCLS
Sbjct: 61 PFDANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSST 120
Query: 369 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIG 548
D P LQFE AWALTNIASGTS QT VV+AGAVP+FLQLL + NVC+Q+VWALGNIIG
Sbjct: 121 D-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIG 179
Query: 549 DGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCRSKDPPPPLKTIQEILPA 728
DGP RD+ +ELG+++PLL I +IPI FLRNVTWVIVNLCR KDP P ++ ILPA
Sbjct: 180 DGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPA 239
Query: 729 LNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
L++LI H D+++L+DTVWA+ YLTDGGNE I
Sbjct: 240 LSLLIHHQDTNILIDTVWALSYLTDGGNEHI 270
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +3
Query: 300 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 479
N I +I A ++ LV L D +Q A+ NI +GT QT V+ +G +
Sbjct: 267 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 325
Query: 480 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 656
LL E + +AVW + NI V + G++ ++ L+ + D P + W
Sbjct: 326 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 383
Query: 657 VIVNLCRSKDP 689
I N+ S P
Sbjct: 384 AISNVTISGRP 394
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/170 (20%), Positives = 61/170 (35%)
Frame = +3
Query: 312 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 491
D + GIL L+Q ++ W + N+ + V +P L+
Sbjct: 186 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 245
Query: 492 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNL 671
N+ VWAL + G VIE VV L+ L+ + + + N+
Sbjct: 246 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL-GHVDVKVQTAALRAVGNI 304
Query: 672 CRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
D L +L + L+ H + + VW + +T G +Q+
Sbjct: 305 VTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNITAGNQQQV 354
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 264 bits (646), Expect = 7e-71
Identities = 122/180 (67%), Positives = 147/180 (81%)
Frame = +3
Query: 282 LLSCDKNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAG 461
+LS D+NPPID+LI +GILP+LVQCLS D P LQFE AWALTNIASGTS QT VV+AG
Sbjct: 1 MLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAG 59
Query: 462 AVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFL 641
AVP+FLQLL + NVC+Q+VWALGNIIGDGP RD+ +ELG+++PLL I +IPI FL
Sbjct: 60 AVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFL 119
Query: 642 RNVTWVIVNLCRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
RNVTWVIVNLCR KDP P ++ ILPAL++LI H D+++L+DTVWA+ YLTDGGNE I
Sbjct: 120 RNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIHHQDTNILIDTVWALSYLTDGGNEHI 179
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +3
Query: 300 NPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 479
N I +I A ++ LV L D +Q A+ NI +GT QT V+ +G +
Sbjct: 176 NEHIQMVIEAQVVTHLVPLLGHVD-VKVQTAALRAVGNIVTGTDEQTQLVLDSGVLRFMP 234
Query: 480 QLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLI-KSDIPIPFLRNVTW 656
LL E + +AVW + NI V + G++ ++ L+ + D P + W
Sbjct: 235 GLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDFPTQ--KEAAW 292
Query: 657 VIVNLCRSKDP 689
I N+ S P
Sbjct: 293 AISNVTISGRP 303
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/170 (20%), Positives = 61/170 (35%)
Frame = +3
Query: 312 DELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 491
D + GIL L+Q ++ W + N+ + V +P L+
Sbjct: 95 DYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIH 154
Query: 492 SPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNL 671
N+ VWAL + G VIE VV L+ L+ + + + N+
Sbjct: 155 HQDTNILIDTVWALSYLTDGGNEHIQMVIEAQVVTHLVPLL-GHVDVKVQTAALRAVGNI 213
Query: 672 CRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
D L +L + L+ H + + VW + +T G +Q+
Sbjct: 214 VTGTDEQTQLVLDSGVLRFMPGLLAHYKEKINKEAVWFVSNITAGNQQQV 263
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 182 bits (443), Expect = 3e-46
Identities = 105/278 (37%), Positives = 154/278 (55%), Gaps = 12/278 (4%)
Frame = +3
Query: 24 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 179
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 180 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 353
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 354 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 533
LS +N +Q+E AWALTNI SG++ QT V AG + L + + +QA+WA+
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198
Query: 534 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCRSKDPPPPLKT 707
NI GD LRD+VI+ V+ L+ L++ + +R + W N+CR K+P PL+
Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEV 258
Query: 708 IQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
++ + L L+ H D V D WA+ YLTDG +EQI
Sbjct: 259 LRVLSKGLVKLVQHTDRQVRQDACWAVSYLTDGPDEQI 296
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 1/176 (0%)
Frame = +3
Query: 297 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 476
KNP + + LV+ + D Q + WA++ + G Q +G +P
Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308
Query: 477 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 656
+ EN+ A+ LGN+ L VI+LG + +L L++ ++ W
Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367
Query: 657 VIVNLCRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGG-NEQI 821
++ N+ +LP L ++ D + WA+ L GG N Q+
Sbjct: 368 LVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQV 423
Score = 44.8 bits (101), Expect = 8e-05
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Frame = +3
Query: 150 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 323
+SY TD +E+I+ + L +V AEN +A + ++ + +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341
Query: 324 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 503
G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401
Query: 504 NVCDQAVWALGNIIGDG 554
+A WAL N+ G
Sbjct: 402 KCQFEASWALSNLAQGG 418
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 182 bits (443), Expect = 3e-46
Identities = 105/278 (37%), Positives = 154/278 (55%), Gaps = 12/278 (4%)
Frame = +3
Query: 24 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 179
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 180 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 353
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 354 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 533
LS +N +Q+E AWALTNI SG++ QT V AG + L + + +QA+WA+
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198
Query: 534 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCRSKDPPPPLKT 707
NI GD LRD+VI+ V+ L+ L++ + +R + W N+CR K+P PL+
Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEV 258
Query: 708 IQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
++ + L L+ H D V D WA+ YLTDG +EQI
Sbjct: 259 LRVLSKGLVKLVQHTDRQVRQDACWAVSYLTDGPDEQI 296
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 1/176 (0%)
Frame = +3
Query: 297 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 476
KNP + + LV+ + D Q + WA++ + G Q +G +P
Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308
Query: 477 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 656
+ EN+ A+ LGN+ L VI+LG + +L L++ ++ W
Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367
Query: 657 VIVNLCRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGG-NEQI 821
++ N+ +LP L ++ D + WA+ L GG N Q+
Sbjct: 368 LVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQV 423
Score = 44.8 bits (101), Expect = 8e-05
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Frame = +3
Query: 150 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 323
+SY TD +E+I+ + L +V AEN +A + ++ + +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341
Query: 324 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 503
G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401
Query: 504 NVCDQAVWALGNIIGDG 554
+A WAL N+ G
Sbjct: 402 KCQFEASWALSNLAQGG 418
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 182 bits (443), Expect = 3e-46
Identities = 105/278 (37%), Positives = 154/278 (55%), Gaps = 12/278 (4%)
Frame = +3
Query: 24 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNV--------PISYSTDEEEI 179
R+ +KN K +E+RRRR E +VE+RK K + + KRRN+ S + E+I
Sbjct: 21 RLQQYKNLTKH-EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKI 79
Query: 180 DKNLATTDLDELVMNAANAENP--EAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQ 353
++T L + A + NP + + + RK LS KNPPIDE+I G+L LVQ
Sbjct: 80 SHQQSSTRLSNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQ 139
Query: 354 CLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWAL 533
LS +N +Q+E AWALTNI SG++ QT V AG + L + + +QA+WA+
Sbjct: 140 ALS-VENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAV 198
Query: 534 GNIIGDGPVLRDFVIELGVVKPLLSLIK--SDIPIPFLRNVTWVIVNLCRSKDPPPPLKT 707
NI GD LRD+VI+ V+ L+ L++ + +R + W N+CR K+P PL+
Sbjct: 199 ANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEV 258
Query: 708 IQEILPALNVLILHNDSSVLVDTVWAIXYLTDGGNEQI 821
++ + L L+ H D V D WA+ YLTDG +EQI
Sbjct: 259 LRVLSKGLVKLVQHTDRQVRQDACWAVSYLTDGPDEQI 296
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 1/176 (0%)
Frame = +3
Query: 297 KNPPIDELIAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 476
KNP + + LV+ + D Q + WA++ + G Q +G +P
Sbjct: 250 KNPHAPLEVLRVLSKGLVKLVQHTDRQVRQ-DACWAVSYLTDGPDEQIELARESGVLPHV 308
Query: 477 LQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTW 656
+ EN+ A+ LGN+ L VI+LG + +L L++ ++ W
Sbjct: 309 VAFFKEA-ENLVAPALRTLGNVATGNDSLTQAVIDLGSLDEILPLMEKTRSSSIVKECCW 367
Query: 657 VIVNLCRSKDPPPPLKTIQEILPALNVLILHNDSSVLVDTVWAIXYLTDGG-NEQI 821
++ N+ +LP L ++ D + WA+ L GG N Q+
Sbjct: 368 LVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHKCQFEASWALSNLAQGGTNRQV 423
Score = 44.8 bits (101), Expect = 8e-05
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Frame = +3
Query: 150 ISYSTD--EEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 323
+SY TD +E+I+ + L +V AEN +A + ++ + +I
Sbjct: 285 VSYLTDGPDEQIELARESGVLPHVVAFFKEAEN---LVAPALRTLGNVATGNDSLTQAVI 341
Query: 324 AAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHE 503
G L ++ + + + ++ E W ++NI +GT Q V+ A +PV + +L S
Sbjct: 342 DLGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDH 401
Query: 504 NVCDQAVWALGNIIGDG 554
+A WAL N+ G
Sbjct: 402 KCQFEASWALSNLAQGG 418
>Z74043-9|CAA98540.1| 524|Caenorhabditis elegans Hypothetical
protein T19B10.7 protein.
Length = 524
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +3
Query: 18 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 191
+ R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L
Sbjct: 10 EERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67
>AF040997-1|AAB97173.1| 524|Caenorhabditis elegans importin alpha 1
protein.
Length = 524
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +3
Query: 18 KNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 191
+ R ++K+ +D +EMRR+R E V++RKN+R+E ++ R + + S EE + L
Sbjct: 10 EERSKMYKSNVRDQNEMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSELL 67
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 40.3 bits (90), Expect = 0.002
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Frame = +3
Query: 204 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 383
L E++ ++A+ + QL A + L D N +E G +P L+ L R+D P +
Sbjct: 523 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 579
Query: 384 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHE-NVCDQAVWALGNIIGDG 554
Q L N++ G NK V+ A V + ++L + H+ +V ++A AL N+
Sbjct: 580 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSSAD 639
Query: 555 ---PVLRDFVIEL---GVVKPLLSLIKSDIPIPF----LRNVTWVIVNL-CRSKDPPPPL 701
PV+ + E+ V+ P+L++ SD F +N T V+ N+ S+ L
Sbjct: 640 MLKPVILESATEILSQQVIAPVLAVGTSDPTRHFGSTLFKNSTGVLRNVSAASQQARRRL 699
Query: 702 KTIQEILPALNVLILHNDSSVLVDT 776
+ I ++ AL + H VD+
Sbjct: 700 RDIPNLIEALVHFLTHAIQKSQVDS 724
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 40.3 bits (90), Expect = 0.002
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Frame = +3
Query: 204 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILVQCLSRADNPAL 383
L E++ ++A+ + QL A + L D N +E G +P L+ L R+D P +
Sbjct: 693 LKEVIEYLSSADK-DKQLNASGYLQHLTYTD-NQIKEETREYGGIPKLIALL-RSDTPRI 749
Query: 384 QFETAWALTNIASGTSAQTNK--VVHAGAVPVFLQLLMSPHE-NVCDQAVWALGNIIGDG 554
Q L N++ G NK V+ A V + ++L + H+ +V ++A AL N+
Sbjct: 750 QKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSSAD 809
Query: 555 ---PVLRDFVIEL---GVVKPLLSLIKSDIPIPF----LRNVTWVIVNL-CRSKDPPPPL 701
PV+ + E+ V+ P+L++ SD F +N T V+ N+ S+ L
Sbjct: 810 MLKPVILESATEILSQQVIAPVLAVGTSDPTRHFGSTLFKNSTGVLRNVSAASQQARRRL 869
Query: 702 KTIQEILPALNVLILHNDSSVLVDT 776
+ I ++ AL + H VD+
Sbjct: 870 RDIPNLIEALVHFLTHAIQKSQVDS 894
>Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical
protein F53B2.5 protein.
Length = 447
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/127 (18%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 384 QFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVL 563
+ W +TN+ + T+ V++ + + ++L+ S + + Q VWA+ NI D
Sbjct: 58 EVNAVWIITNMCCISQEVTHLFVNSNCLDILIKLVRSQNARLSSQTVWAIANIAADCSSC 117
Query: 564 RDFVIELGVVKPLLSLIKSDIPIPFL--RNVTWVIVNLCRSKDPPPPLKTIQEILPALNV 737
+ ++K L +++ + R + W + N+ P + ++ AL+
Sbjct: 118 KLKCRSPKLLKILARNLQTSYKLDDADRRQLIWCVNNIFSGGRTTMPSPVARSLICALSA 177
Query: 738 LILHNDS 758
++L D+
Sbjct: 178 ILLDTDA 184
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Frame = +3
Query: 321 IAAGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPH 500
+ + L IL++ L R+ N L +T WA+ NIA+ S+ K + + + L + +
Sbjct: 80 VNSNCLDILIK-LVRSQNARLSSQTVWAIANIAADCSSCKLKCRSPKLLKILARNLQTSY 138
Query: 501 E-NVCD--QAVWALGNIIGDG------PVLRDFVIELGVV 593
+ + D Q +W + NI G PV R + L +
Sbjct: 139 KLDDADRRQLIWCVNNIFSGGRTTMPSPVARSLICALSAI 178
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 411 NIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGDGPVLRDFVIE 581
NIA G QT+ +V V + + MS E+ +A W + N++ P D++++
Sbjct: 246 NIAVGNDVQTDLLVDNPKFRVVMNIAMSSPEHH-SEAAWIISNVVAGAPRHVDYIMD 301
>AF024493-2|AAB70323.1| 322|Caenorhabditis elegans Hypothetical
protein F23F1.5 protein.
Length = 322
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +3
Query: 24 RMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 203
R +KN K ++ +RR E T+E +KN R +T K RN+ T +E+ ++ + TT
Sbjct: 28 RYSQYKNLTKAAEQQAKRREE-TLERQKNGRFDTFMKLRNLAFDDVTSDEDDEQKIETTT 86
Query: 204 LDE 212
++
Sbjct: 87 AEK 89
>AF003136-1|AAK21379.3| 896|Caenorhabditis elegans Importin beta
family protein 1 protein.
Length = 896
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +3
Query: 372 NPALQFETA--WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNII 545
NP +++ A A +I G + + A+P + + + NV D A W+LG +I
Sbjct: 383 NPDWKYKEAAIMAFGSILDGPDPKKLLPMAQEALPAIVAAMCDKNVNVRDTAAWSLGRVI 442
Query: 546 GDGPVLRDFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCRS 680
L + L V P+LS P NV W +V+L ++
Sbjct: 443 DTCSELANNAELLQSVLPVLSNGLHQEP-RVANNVCWALVSLVKA 486
>Z83120-3|CAB05587.1| 419|Caenorhabditis elegans Hypothetical
protein R06A4.4b protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +3
Query: 474 FLQLLMSPHE-NVCDQAVWALGNI-IGDGPVLRDFVIELGVVKPLLSLIKS 620
FL + P + +VC+ A+WALG + + GP ++ F+ +++PL+ +I S
Sbjct: 240 FLAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGP--IIEPLIVVINS 288
>Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical
protein R06A4.4a protein.
Length = 883
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +3
Query: 474 FLQLLMSPHE-NVCDQAVWALGNI-IGDGPVLRDFVIELGVVKPLLSLIKS 620
FL + P + +VC+ A+WALG + + GP ++ F+ +++PL+ +I S
Sbjct: 704 FLAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGP--IIEPLIVVINS 752
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.75
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 105 KNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 236
+ +R + +KR++ S T +EE ++LATTD + V+N A++
Sbjct: 260 ERERARSRRKRKDEASSAVTSDEEDQEDLATTDSENPVINGASS 303
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/80 (22%), Positives = 43/80 (53%)
Frame = +3
Query: 42 NAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVM 221
++ D EM RRR + + K +++ +++R V S S DE+E +K + + +
Sbjct: 246 DSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKRAVNDSSSDDEDEEEKPEKRSKKSKKAV 305
Query: 222 NAANAENPEAQLAAVQQCRK 281
+++E+ E + ++ ++ +K
Sbjct: 306 IDSSSEDEEEEKSSKKRSKK 325
>AF067608-11|AAC17656.2| 368|Caenorhabditis elegans Hypothetical
protein B0511.11 protein.
Length = 368
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 111 KREETLQKRRNVPIS--YSTDEEEIDKNLATTDLDE 212
K+E+ KR NVP++ YS + KN +TT L E
Sbjct: 98 KKEDDKSKRENVPLTVVYSNPSISVSKNFSTTPLAE 133
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 9 DQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDK 185
D+ + +M+V + A KD E R ++++ E R+ K EE +K + D+E+IDK
Sbjct: 1043 DEQRRKMNV-ERAKKD--EERAKKDKRDAEERRKKDEERAKKDKEDAKKAKEDQEKIDK 1098
>Z99710-12|CAI79158.1| 333|Caenorhabditis elegans Hypothetical
protein Y18D10A.22 protein.
Length = 333
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 408 LKPKRSRTVTLDCQPSKGTELGWGVFQQL 322
LKPK SRT+ + +K +E+ W + + +
Sbjct: 24 LKPKHSRTIIVGTHKAKSSEMFWNLLESI 52
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 51 KDVDEMRRRRNEVTVELRKN-KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNA 227
K+ +EMR+R ++ E+R N +R + ++K ++E+ L + + +
Sbjct: 222 KEKEEMRQRMSDEMSEMRNNIERLQKMEKALERENERLNHQKELSDKLKVVNEENNDLRQ 281
Query: 228 ANAENPEAQLAAVQQCRKLLSCDKNPPIDELIA-AGIL 338
AEN +LA ++ + C+ + DEL A GIL
Sbjct: 282 NLAEN-HLELAMIKSELAQVRCEFDQKQDELSARRGIL 318
>AL034393-28|CAI79175.1| 333|Caenorhabditis elegans Hypothetical
protein Y18D10A.22 protein.
Length = 333
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 408 LKPKRSRTVTLDCQPSKGTELGWGVFQQL 322
LKPK SRT+ + +K +E+ W + + +
Sbjct: 24 LKPKHSRTIIVGTHKAKSSEMFWNLLESI 52
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 93 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 269
V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400
Query: 270 QCRKLLS-CDKNPP 308
+ R ++S ++PP
Sbjct: 401 EKRNVISFIPEDPP 414
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 93 VELRKNKREETLQKR-RNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQ 269
V L +K+E+ L R RN+ +S+ DE+ + + T D+ + + A + L V
Sbjct: 341 VSLTSSKKEKRLHCRLRNMQLSFHDDEDSTEPSNGTFDIKGIYLFRHMASDTPYILIHVG 400
Query: 270 QCRKLLS-CDKNPP 308
+ R ++S ++PP
Sbjct: 401 EKRNVISFIPEDPP 414
>AC006621-3|AAK68263.1| 368|Caenorhabditis elegans Hypothetical
protein C52A10.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 323 YELINRRVFITREQFSALLHS 261
YEL+ R +F+T EQ S +L+S
Sbjct: 199 YELVGREIFLTSEQLSKVLNS 219
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 39 KNAGKDVDEMRRRRNEVTVE--LRKNKREETLQKRRNV--PISYSTDEEEIDKNLATTDL 206
+ +D D RRRR E + E R+++R E +RR V P E+E +N ++
Sbjct: 69 RETDRDDDRRRRRRRESSDEEDRRRHRRHEDYGRRRQVEKPEVLGKVEDESSENEQESEE 128
Query: 207 DE 212
DE
Sbjct: 129 DE 130
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Frame = +3
Query: 3 ATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR-----NVPISYSTD 167
A D+A+ + KD DE+ RR ++ + ++ RE+ R N S +T
Sbjct: 202 AEDRARIEKKEEEMEHKDWDELEARRRKIFEDEKEKNREDDASIRESMVSANTEFSEATK 261
Query: 168 EEEIDKNLATTDLDELVMNAANAENPE-AQLAAVQQCRKLLSCD 296
EE + N D ++ V E + A+L + + + S D
Sbjct: 262 EEMNEINNILQDAEQRVAETKKQEEHDAAELRTLMKSTRQKSLD 305
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -3
Query: 436 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 257
C + A +NC +G + M S+ +A + S HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685
Query: 256 NCA--SGFSALAAFITSSS 206
C +G+S +A I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = -3
Query: 436 CADVPEAMFVKAQAVSNCNAGLSALERH*TRMGSIPAAMSSSIGGFLSHESSFLHCCTAA 257
C + A +NC +G + M S+ +A + S HC T A
Sbjct: 626 CKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLCSGHGHCTTTA 685
Query: 256 NCA--SGFSALAAFITSSS 206
C +G+S +A I S+S
Sbjct: 686 RCVCFNGWSGVACDIRSNS 704
>L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome
assembly factor protein19 protein.
Length = 282
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +3
Query: 39 KNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELV 218
+ A KD +M + + E K + + P+ D E + A L E
Sbjct: 56 QKAAKDFQKMLEQMVTLQEEAMKKAGADPSEGEGEQPLD-PNDPEALAMMDALKQLMECS 114
Query: 219 MNAANAENPEAQLAAVQQCR 278
N ANA NPE +A + R
Sbjct: 115 SNVANASNPEEFMAGLDMLR 134
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 51 KDVDEMRR---RRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID 182
+D D+ RR RR++V + R+ KREE ++ + S DE+EID
Sbjct: 585 RDRDDARRKDRRRDDVRKKERREKREEEDDDQKTKD-AESKDEDEID 630
>AJ249344-1|CAB77052.1| 449|Caenorhabditis elegans putative
integrin-linked kinase protein.
Length = 449
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 567 DFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR---SKDPPPPLKTIQEILPALNV 737
D V + V+ + + I D F + N+C + + PP L I + +P ++
Sbjct: 216 DIVARILNVQEVTARISRDFQTEFPALRIFAHPNICAVLAAANQPPNLVIISQYMPFGSL 275
Query: 738 L-ILHNDSSVLVDTVWAIXYLTD 803
+LH SSV++D A+ + D
Sbjct: 276 YNVLHEQSSVVIDHGQAVRFALD 298
>AF099913-1|AAC68756.1| 466|Caenorhabditis elegans Paralysed arrest
at two-fold protein4 protein.
Length = 466
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 567 DFVIELGVVKPLLSLIKSDIPIPFLRNVTWVIVNLCR---SKDPPPPLKTIQEILPALNV 737
D V + V+ + + I D F + N+C + + PP L I + +P ++
Sbjct: 233 DIVARILNVQEVTARISRDFQTEFPALRIFAHPNICAVLAAANQPPNLVIISQYMPFGSL 292
Query: 738 L-ILHNDSSVLVDTVWAIXYLTD 803
+LH SSV++D A+ + D
Sbjct: 293 YNVLHEQSSVVIDHGQAVRFALD 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,456,445
Number of Sequences: 27780
Number of extensions: 433961
Number of successful extensions: 1585
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1546
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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