Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_K02
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0462 + 9583558-9584910                                           94   1e-19
07_03_0778 + 21459483-21459778,21460531-21462784,21462992-21463432     32   0.60 
11_06_0416 + 23307984-23308281,23310083-23310900                       31   1.0  
11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009           31   1.4  
12_02_0854 + 23697826-23698033,23699111-23699276,23699430-236994...    29   5.6  
11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861           29   5.6  
08_01_0901 - 8873905-8874076,8874674-8874786,8875388-8875522,887...    28   7.4  
12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110     28   9.8  

>09_02_0462 + 9583558-9584910
          Length = 450

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +3

Query: 624 NVSDAFYRYKMPRICAKVEGKGNGIKTVIVNMPEVAKALGRPXTYPTKYFGCELGA 791
           N  DAFYRYKMPR+  K+EG+GNGIKT IVNM ++AKAL RP +Y TKYFGCELGA
Sbjct: 10  NRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGA 65


>07_03_0778 + 21459483-21459778,21460531-21462784,21462992-21463432
          Length = 996

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 379 WLC*ASCTLDGWRPFLLWQHTDYSPRTVLMFLNILLKSYKTVTPRWTRALR 227
           WL    C LD W+  +   H +     VL  + ILL   K++TP++  +LR
Sbjct: 127 WLIAIVCILDVWKLLIPLPHKNVMAAVVLYAMIILLILGKSMTPKFQPSLR 177


>11_06_0416 + 23307984-23308281,23310083-23310900
          Length = 371

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -3

Query: 728 DFRHVDD----DRLDAVPLPFDLGAYPRHLVPVERIGDVTVHV*GTHF 597
           D R  DD     +L  VPLP D+GA+   L+      DV +HV G  F
Sbjct: 165 DIRTEDDATTVKKLVGVPLPSDIGAHLGRLLAAGHGADVAIHVGGETF 212


>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
          Length = 431

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -3

Query: 518 TGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQNFDVLRTVYLVVLSVMHPRRLAA 339
           T ++ +     SA   P+A++S +   G +FR + ++    L   YL   SV+ PR LAA
Sbjct: 135 TATTTTTTTSSSATSPPSALSSPLSSIGGSFRAMQIRK---LSGCYLHCHSVLDPRTLAA 191

Query: 338 V 336
           V
Sbjct: 192 V 192


>12_02_0854 +
           23697826-23698033,23699111-23699276,23699430-23699466,
           23699531-23700145
          Length = 341

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 83  VVDRSTPFNNVFREVSFKLTVWCVAGRCGV 172
           +++R T F N+ R  SF  TV     +CG+
Sbjct: 182 LIERCTEFTNILRSASFTKTVRLYGEKCGL 211


>11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861
          Length = 592

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 252 VTVLYDFSKIFRNISTVRGE*SVCCHRRN 338
           + V+ DF+ IFR +  + G   V CH RN
Sbjct: 149 IAVMRDFTDIFRKLLGIPGSAHVGCHGRN 177


>08_01_0901 -
           8873905-8874076,8874674-8874786,8875388-8875522,
           8875661-8875792,8876136-8876301,8877154-8877248,
           8878983-8879104,8879283-8879403,8879556-8879633,
           8879730-8879991,8880196-8880366,8881070-8881710
          Length = 735

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 787 PNSQPKYFV-GYVXGLPSALATSGMLTMTVLMPFPFPSTLAHIRGILYR*NASETLRFTF 611
           P + P + V G   G+   L ++G++   +  P P PST+A+++ +          RF F
Sbjct: 25  PLTSPAFAVFGANTGVGKTLVSAGLVASLLASPSPSPSTVAYLKPLQTGFPDDSDARFVF 84


>12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110
          Length = 530

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 286 ETSVLCAE---SSRCVATGGTAASRRGCMTLNTTRYTVRRTSKFCSNRHR 426
           E S LC +       +  GG    R  C  + TTR+++ + +++C+  HR
Sbjct: 157 EESGLCDDVIAHDAAMLNGGFEIGRVFCFRVETTRWSLEQLNRWCAALHR 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,365,252
Number of Sequences: 37544
Number of extensions: 511600
Number of successful extensions: 1339
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)