Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_K02
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical p...   108   4e-24
U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical p...   108   4e-24
U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical p...   108   4e-24
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    29   5.0  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    29   5.0  
U97549-3|AAO91737.1|  402|Caenorhabditis elegans Dopamine recept...    29   5.0  
U97549-2|AAO91738.1|  399|Caenorhabditis elegans Dopamine recept...    29   5.0  
Z92786-3|CAB63202.1|  488|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical
           protein C37C3.2b protein.
          Length = 402

 Score =  108 bits (260), Expect = 4e-24
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = +3

Query: 606 SLNVNRNVSDAFYRYKMPRICAKVEGKGNGIKTVIVNMPEVAKALGRPXTYPTKYFGCEL 785
           +LNVNR V+D FYRYKMP++ AKVEGKGNGIKTVI NM E+AKAL RP  YPTKYFGCEL
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCEL 61

Query: 786 GA 791
           GA
Sbjct: 62  GA 63


>U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical
           protein C37C3.2a protein.
          Length = 436

 Score =  108 bits (260), Expect = 4e-24
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = +3

Query: 606 SLNVNRNVSDAFYRYKMPRICAKVEGKGNGIKTVIVNMPEVAKALGRPXTYPTKYFGCEL 785
           +LNVNR V+D FYRYKMP++ AKVEGKGNGIKTVI NM E+AKAL RP  YPTKYFGCEL
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCEL 61

Query: 786 GA 791
           GA
Sbjct: 62  GA 63


>U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical
           protein C37C3.2c protein.
          Length = 413

 Score =  108 bits (260), Expect = 4e-24
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = +3

Query: 606 SLNVNRNVSDAFYRYKMPRICAKVEGKGNGIKTVIVNMPEVAKALGRPXTYPTKYFGCEL 785
           +LNVNR V+D FYRYKMP++ AKVEGKGNGIKTVI NM E+AKAL RP  YPTKYFGCEL
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCEL 61

Query: 786 GA 791
           GA
Sbjct: 62  GA 63


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 168 PHRPATHHTVNLNDTSRKTLLNGVLLSTTLTDYL 67
           PH PA H+  N++D   +  L GV++ T L  +L
Sbjct: 61  PHTPAAHNRSNISDQKARLTL-GVIMGTFLVCWL 93


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 168 PHRPATHHTVNLNDTSRKTLLNGVLLSTTLTDYL 67
           PH PA H+  N++D   +  L GV++ T L  +L
Sbjct: 309 PHTPAAHNRSNISDQKARLTL-GVIMGTFLVCWL 341


>U97549-3|AAO91737.1|  402|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformb protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 168 PHRPATHHTVNLNDTSRKTLLNGVLLSTTLTDYL 67
           PH PA H+  N++D   +  L GV++ T L  +L
Sbjct: 251 PHTPAAHNRSNISDQKARLTL-GVIMGTFLVCWL 283


>U97549-2|AAO91738.1|  399|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformc protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 168 PHRPATHHTVNLNDTSRKTLLNGVLLSTTLTDYL 67
           PH PA H+  N++D   +  L GV++ T L  +L
Sbjct: 251 PHTPAAHNRSNISDQKARLTL-GVIMGTFLVCWL 283


>Z92786-3|CAB63202.1|  488|Caenorhabditis elegans Hypothetical
           protein F47H4.6 protein.
          Length = 488

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +3

Query: 201 EARINNSSSRRALVHLGVTVLYDFSKIFRNISTVRGE*SVCCHRRNGRQPSRVH 362
           EAR+  SS R +++ + V +L+ FSKI  ++ T+    ++    +  R PS  H
Sbjct: 383 EARVFESS-RNSILQIYVGILFHFSKIDVSLKTLSNSNAIQMRDKLLRSPSFEH 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,135,572
Number of Sequences: 27780
Number of extensions: 411872
Number of successful extensions: 925
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)