Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J23
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U97008-8|AAB52306.2|  307|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF067210-2|AAC16984.1|  308|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z68119-1|CAA92191.1|  523|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   8.7  

>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 379 IAALSPLDARVKLFHSYLGLIPNLSQFTTSE 471
           I A SPLD + K+F   +   P LS++TT E
Sbjct: 189 IKATSPLDDKSKMFMDRIVKKPYLSKYTTKE 219


>U97008-8|AAB52306.2|  307|Caenorhabditis elegans Hypothetical
           protein C03G6.6 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 384 RYPNEPKTTIFPSVKNSGAFNFNLIGLG 301
           ++ N+ K  +FP V N+G  N   IG+G
Sbjct: 101 KHKNKTKRVLFPKVFNTGPHNLFTIGVG 128


>U58753-5|AAC24434.2|  348|Caenorhabditis elegans Hypothetical
           protein W03B1.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 158 ETGKNWY*RLSSVATSMTLAMIVV 87
           ET + WY +LSS +T+M +A++ V
Sbjct: 15  ETFEKWYLKLSSTSTAMLIAILFV 38


>AF067210-2|AAC16984.1|  308|Caenorhabditis elegans Hypothetical
           protein C04F1.1 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 375 NEPKTTIFPSVKNSGAFNFNLIGLG 301
           +E K  +FP + N+G  NF  IG+G
Sbjct: 104 DEMKEVLFPKIFNAGPHNFFTIGVG 128


>Z68119-1|CAA92191.1|  523|Caenorhabditis elegans Hypothetical
           protein T18D3.1 protein.
          Length = 523

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 384 RYPNEPKTTIFPSVKNS-GAFNFNLIGLGSIFPDDALSV 271
           RYPN+P T+ F  +K+S  +  F L G   I  D++ S+
Sbjct: 144 RYPNDPITSYFKRLKSSVTSMEFYLNGNDLILGDESGSI 182


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 232 SDPMYEVMIGGWGNAKSVIRKNRTK 306
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,835,402
Number of Sequences: 27780
Number of extensions: 293470
Number of successful extensions: 835
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)