Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J19
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    29   0.20 
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   7.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.7  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 362 FSDVIFKLLSFHKLVMFFCSL*ISFHGLTYLFLFVQCLP 246
           FSD+ FKL    K + +  +L I   G+T+L + V  LP
Sbjct: 232 FSDITFKLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLP 270


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = +3

Query: 504 PARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYKYEDQVIRKKATPDPNGNL 683
           P+ +   F   G PHH L   G P   +      D    +  Y D  + ++   D N N 
Sbjct: 572 PSTEQFRFCNCGWPHHLLIPKGTPEGMQF-----DLFAMISNYADDTVNQEF--DENVNC 624

Query: 684 QLGGSMWVNKDQL 722
               S    +DQL
Sbjct: 625 NDSHSFCGLRDQL 637


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 285 WPYLSFSFCSVSPNL 241
           WPYL  S CS  P L
Sbjct: 53  WPYLLCSSCSAMPAL 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,495
Number of Sequences: 2352
Number of extensions: 16380
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)