Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J19
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...   208   6e-54
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...   208   6e-54
BT011194-1|AAR88556.1|  398|Drosophila melanogaster LD16247p pro...    32   0.73 
X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein ...    29   5.2  
M31684-1|AAA28393.1|  782|Drosophila melanogaster protein ( D.me...    29   5.2  
AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p pro...    29   5.2  
AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA...    29   5.2  

>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score =  208 bits (508), Expect = 6e-54
 Identities = 94/155 (60%), Positives = 116/155 (74%)
 Frame = +3

Query: 291 AYLERAKEHDEFMKRQQFEYNIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAA 470
           AYL+RA EHDEFMK Q  E+ IGKRHLANMMG D E FTQ+D++ AI YLFPSG+YD  A
Sbjct: 61  AYLKRATEHDEFMKTQHLEFQIGKRHLANMMGADAETFTQEDIDEAISYLFPSGLYDQKA 120

Query: 471 RPSMRPPEDVFPARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYKYEDQVIR 650
           RP+M+ PE VFPARKAAEFDE GRP H +FYTGKPNFF+LLHD  +   +L   E++++R
Sbjct: 121 RPAMKSPEVVFPARKAAEFDETGRPFHSMFYTGKPNFFQLLHDIVEETNKLADLEERMLR 180

Query: 651 KKATPDPNGNLQLGGSMWVNKDQLEQLLXEKISDL 755
           +   PD N  L++ G   + KDQLE LL E I+D+
Sbjct: 181 RGNKPDENQKLEIAGFQLLPKDQLELLLVESIADI 215


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score =  208 bits (508), Expect = 6e-54
 Identities = 94/155 (60%), Positives = 116/155 (74%)
 Frame = +3

Query: 291 AYLERAKEHDEFMKRQQFEYNIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAA 470
           AYL+RA EHDEFMK Q  E+ IGKRHLANMMG D E FTQ+D++ AI YLFPSG+YD  A
Sbjct: 61  AYLKRATEHDEFMKTQHLEFQIGKRHLANMMGADAETFTQEDIDEAISYLFPSGLYDQKA 120

Query: 471 RPSMRPPEDVFPARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYKYEDQVIR 650
           RP+M+ PE VFPARKAAEFDE GRP H +FYTGKPNFF+LLHD  +   +L   E++++R
Sbjct: 121 RPAMKSPEVVFPARKAAEFDETGRPFHSMFYTGKPNFFQLLHDIVEETNKLADLEERMLR 180

Query: 651 KKATPDPNGNLQLGGSMWVNKDQLEQLLXEKISDL 755
           +   PD N  L++ G   + KDQLE LL E I+D+
Sbjct: 181 RGNKPDENQKLEIAGFQLLPKDQLELLLVESIADI 215


>BT011194-1|AAR88556.1|  398|Drosophila melanogaster LD16247p
           protein.
          Length = 398

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 585 KLLHDAADHLQQLYKYEDQVIRKKATPDPNGNLQL 689
           K  H A  HLQ L+  E  +++K  +P P  NL +
Sbjct: 20  KSSHTAITHLQNLHMVEQLIVQKNFSPSPTDNLSI 54


>X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 562 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 672
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>M31684-1|AAA28393.1|  782|Drosophila melanogaster protein (
           D.melanogaster cytoskeleton-like bicaudalD protein
           (BicD) mRNA, complete cds. ).
          Length = 782

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 562 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 672
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 562 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 672
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


>AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 562 ILENQISLNYFMTLPTIYNNFTNMKTKLL--ERKQLLIQ 672
           I E Q  LNY     T+ N  TN+K KLL  E+K L +Q
Sbjct: 431 IAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQ 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,971,352
Number of Sequences: 53049
Number of extensions: 649892
Number of successful extensions: 1922
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1921
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)