Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J19
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 116 1e-26
Z73972-7|CAA98262.2| 305|Caenorhabditis elegans Hypothetical pr... 34 0.13
U56965-2|AAB52667.3| 581|Caenorhabditis elegans Hypothetical pr... 32 0.38
AL032630-10|CAA21566.1| 396|Caenorhabditis elegans Hypothetical... 30 2.0
AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical ... 29 3.6
Z66520-7|CAA91384.1| 286|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF047657-2|AAK18950.2| 358|Caenorhabditis elegans Serpentine re... 28 6.2
U70857-12|AAB09168.1| 337|Caenorhabditis elegans Serpentine rec... 28 8.2
AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical ... 28 8.2
AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical ... 28 8.2
AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical ... 28 8.2
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 116 bits (280), Expect = 1e-26
Identities = 58/153 (37%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Frame = +3
Query: 294 YLERAKEHDEFMKRQQFEYNIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAAR 473
YL+ +++H M++ + E+ G+RHLA MM D Q+ ++RAI YLFPSG+ DP AR
Sbjct: 38 YLKHSQQHVAMMEKHRAEFETGRRHLAKMMSLDIHELDQEAIDRAILYLFPSGLTDPNAR 97
Query: 474 PSMRPPEDVFPARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYK-YEDQVIR 650
P MRPP+++ P + FDE G+P F+T P + LL D + K Y++ V
Sbjct: 98 PVMRPPDEILPKFQRFTFDEEGKPEGSRFFTLSPKIYGLLSDIGVKTHSVMKFYDEHVGS 157
Query: 651 KKATPDPNGNLQLGGSMWVNKDQLEQLLXEKIS 749
+ L GS WV D+L++ L EK S
Sbjct: 158 RSVNRSDLEPANLSGSQWVTADKLKKKLSEKFS 190
>Z73972-7|CAA98262.2| 305|Caenorhabditis elegans Hypothetical
protein F15H10.5 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1
Query: 422 LYILLSKQFRIFAHHIRKMSFSDVIFKLLSFHKLVMFFCSL 300
LY L K ++ F H ++ MSF +VI L S KLVM F L
Sbjct: 91 LYHKLKKYYKYFEHVMKVMSFVEVIHDLWSGGKLVMQFFEL 131
>U56965-2|AAB52667.3| 581|Caenorhabditis elegans Hypothetical
protein C15H9.5 protein.
Length = 581
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = -1
Query: 437 IFYSALYILLSKQFRIFAHHIRKMSFSDVIFKLLSFHKLVMFFCSL*ISFHGLTYLFL 264
++ S LY L+ ++ H+ S S+ I+++ F +++F +L + FHGL Y FL
Sbjct: 262 LYMSILYFGLA----VYWSHLLCRSNSENIYRVHKFMAVLVFLKALSVFFHGLNYYFL 315
>AL032630-10|CAA21566.1| 396|Caenorhabditis elegans Hypothetical
protein Y62H9A.10 protein.
Length = 396
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 PLNSTKLEDLTIVCFILENQISLNYFMTLP-TIYNNFTNMKTKLLERKQLLIQMAIYNSG 693
PLN + EDL ++ +I ++ F+ +P IY +KT +K+L++ +A+ S
Sbjct: 9 PLNYVRNEDLFVITYIYVVFGAITLFLNIPLAIY----LLKTTSKNQKELIVIIALSLSD 64
Query: 694 VVC 702
VC
Sbjct: 65 TVC 67
>AF068721-1|AAC19263.1| 369|Caenorhabditis elegans Hypothetical
protein ZK1055.5 protein.
Length = 369
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +3
Query: 153 KYFRYPLTIGTFQYCTRTTSDPSNVLNDLTDWETLNXXXXXXXXXXAYLERAKEHDEFMK 332
K + Y LTI T+ + T + P+N + TDW AY+ ++ D M
Sbjct: 90 KKYGYNLTIPTYPFVTVESKFPTNCTWEFTDW-LEQQTRRTDRRPRAYIPDGEQRDYLMN 148
Query: 333 RQQFEYNIGKRHLANMM 383
+ YNI H +++
Sbjct: 149 K----YNIVTWHARDVL 161
>Z66520-7|CAA91384.1| 286|Caenorhabditis elegans Hypothetical
protein F49E12.10 protein.
Length = 286
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 417 HPFE*TIQDLRPSYSQDVVFRCYI 346
HP E I +L P Y V+FRC++
Sbjct: 160 HPLEHAISNLSPIYLGAVLFRCHV 183
>AF047657-2|AAK18950.2| 358|Caenorhabditis elegans Serpentine
receptor, class h protein270 protein.
Length = 358
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 434 FYSALYILLSKQFRIFAHHIRKMSFSDVIFKLLSFHKLVMFFCSL*ISFHG 282
F A+YI +S F + + + + F+ + F +H++ FCSL ++ HG
Sbjct: 240 FLRAIYIQVSAPFLLLSAPVAYL-FTTIYFNF--YHQVANNFCSLLLAVHG 287
>U70857-12|AAB09168.1| 337|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 26 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.2
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = -1
Query: 548 VRSSSFVEFSG--FASGKDVFWWPHRWSCGRIVNTAGE*IFYSALYILLSKQFRIFAHHI 375
V +S++ F G F + + W R S GR+ F +L S + R H+
Sbjct: 174 VGHTSYLPFYGNTFIAYEHRIPWA-RTSYGRLAIALPTLFFTIYSSVLTSAKLRKLGKHM 232
Query: 374 RKMSFS---DVIFKLLSFHKLVMF-FCSL*ISFHGLT 276
RK+ +S IF L F +V+ FC + IS LT
Sbjct: 233 RKVEYSMNIATIFNTLGFILVVILNFCYVGISAQALT 269
>AC024214-5|AAF36077.2| 605|Caenorhabditis elegans Hypothetical
protein Y77E11A.7a protein.
Length = 605
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 351 NIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAARPSMRPPEDVFPARKAAEFD 530
N K+ L M+GE P+ T EY+ +G P++ SM+ + + + AAE D
Sbjct: 470 NSMKKQLDEMLGEPPQHHT--------EYMDEAG--GPSSTSSMKRMK-MMNSHGAAEDD 518
Query: 531 EA---GRPHHCLFYTGKPNF 581
E G HH + +GKP F
Sbjct: 519 EDDDDGGHHHVVGNSGKPRF 538
>AC024214-4|AAM97985.2| 603|Caenorhabditis elegans Hypothetical
protein Y77E11A.7b protein.
Length = 603
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 351 NIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAARPSMRPPEDVFPARKAAEFD 530
N K+ L M+GE P+ T EY+ +G P++ SM+ + + + AAE D
Sbjct: 468 NSMKKQLDEMLGEPPQHHT--------EYMDEAG--GPSSTSSMKRMK-MMNSHGAAEDD 516
Query: 531 EA---GRPHHCLFYTGKPNF 581
E G HH + +GKP F
Sbjct: 517 EDDDDGGHHHVVGNSGKPRF 536
>AC024214-3|AAU05554.1| 577|Caenorhabditis elegans Hypothetical
protein Y77E11A.7c protein.
Length = 577
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 351 NIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAARPSMRPPEDVFPARKAAEFD 530
N K+ L M+GE P+ T EY+ +G P++ SM+ + + + AAE D
Sbjct: 442 NSMKKQLDEMLGEPPQHHT--------EYMDEAG--GPSSTSSMKRMK-MMNSHGAAEDD 490
Query: 531 EA---GRPHHCLFYTGKPNF 581
E G HH + +GKP F
Sbjct: 491 EDDDDGGHHHVVGNSGKPRF 510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,555,668
Number of Sequences: 27780
Number of extensions: 345895
Number of successful extensions: 870
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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