Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J18
         (377 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   1.6  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    23   4.9  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    23   4.9  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    22   8.6  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 18  IRQSSIYTGVSSSLVR 65
           +RQ SI TGVSS L R
Sbjct: 833 VRQRSITTGVSSKLAR 848


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 161 IPSVTSNSFNLIRSWKIASYFGPN*GQQKRIWSH*TRAHSCVN 33
           IP++  N F L  S  I +Y     G+  +++    +  + VN
Sbjct: 52  IPTLVDNGFALWESRAICTYLAEKYGKDDKLYPKDPQKRAVVN 94


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 161 IPSVTSNSFNLIRSWKIASYFGPN*GQQKRIWSH*TRAHSCVN 33
           IP++  N F L  S  I +Y     G+  +++    +  + VN
Sbjct: 52  IPTLVDNGFALWESRAICTYLAEKYGKDDKLYPKDPQKRAVVN 94


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 120 RPNEVKRVRRHGWDFRMSTPNGRRIIMRR 206
           +P+ ++  R+  + +  + PNGR  I+RR
Sbjct: 246 KPSNLEIRRQLSFQYFSTHPNGRNGILRR 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,449
Number of Sequences: 2352
Number of extensions: 5128
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)