Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J14
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   423   e-120
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.45 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   1.8  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   3.2  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.2  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   7.4  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   9.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.8  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  423 bits (1042), Expect = e-120
 Identities = 191/234 (81%), Positives = 210/234 (89%)
 Frame = +2

Query: 32  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYXERHGYIKGVVKDIIHDPGRGAPLAV 211
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDY ERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 212 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEKKM 391
           V+FRDPY+F+  K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLE+K 
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKT 120

Query: 392 GDKGRLARASGNFATVIGHNPDAXRTXVKLPSGAXKVLPSSNRGMVGIVAGGGRIDKPIL 571
           GD+G+LAR SGN+A+VI HNPD  RT VKLPSGA KVLPS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPIL 180

Query: 572 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVKXGTSAGRK 733
           KAGRAYHKYKVKRNCWP VRGVAMNPV HPHGGGNHQHIGKASTVK GT  GRK
Sbjct: 181 KAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRK 234


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 509 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 595
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 647 GSWQHHVRMASSYV*PCTCGMPFQLSK*VCQY 552
           GS  H  R  SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 511 KQQRHGRYCCWRWTY 555
           +QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 140 RHGYIKGVVKDIIHDP 187
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 140 RHGYIKGVVKDIIHDP 187
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -3

Query: 304 STINKLACVEPFGSNEELLPCLELVWIAEVYNSQRCTSTRVMDY 173
           S + KL C+ PF  + ++  C +L     +     C  T    Y
Sbjct: 8   SVVGKLTCLSPFLQSIKVASCCQLEAFLTLPTYGNCLQTIAEKY 51


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 205 GCCTLPRSIQVQDKEGALHCSRR 273
           GCC LP +   Q K+ + + + R
Sbjct: 16  GCCALPANTNAQTKQDSSNNNNR 38


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 561 LSIRPPPATIPTM 523
           + +RPPP  +PTM
Sbjct: 114 MGMRPPPMMVPTM 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,674
Number of Sequences: 2352
Number of extensions: 18449
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)