Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J13
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0168 + 1382531-1383931,1384028-1384150 42 6e-04
10_08_0748 - 20277623-20277736,20277956-20279425 42 7e-04
04_04_0895 - 29168107-29168229,29168617-29170068 40 0.002
02_05_0315 - 27822379-27823899 40 0.002
03_02_0505 + 8981856-8982879,8983014-8983129,8985407-8985994,898... 40 0.003
03_02_0503 + 8951824-8952642,8953159-8953770,8953938-8954042 36 0.048
02_03_0414 - 18792830-18793126,18793131-18793232,18793454-18793753 35 0.084
08_01_0256 + 2102044-2102883,2104208-2104741,2104838-2104945 33 0.19
10_08_0631 - 19435796-19436452,19437237-19438130 32 0.45
05_03_0343 + 12732673-12732792,12732903-12733091,12733220-127333... 32 0.59
02_03_0134 - 15596379-15597689 30 1.8
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 29 4.2
01_07_0118 + 41176159-41178909 29 4.2
04_04_1558 - 34417801-34417920,34418930-34419051,34419458-344195... 29 5.5
02_01_0498 - 3614621-3614674,3614780-3617161 28 7.3
01_06_0084 + 26286463-26288259 28 7.3
07_01_1052 - 9234506-9235037,9235148-9235849,9236169-9236313,923... 28 9.6
05_04_0248 - 19363567-19363814,19363900-19364092,19364202-19364846 28 9.6
>03_01_0168 + 1382531-1383931,1384028-1384150
Length = 507
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/68 (35%), Positives = 30/68 (44%)
Frame = +3
Query: 576 GKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFA 755
G +WF DDD LV VL Y H + +Y+G S L+FS+ A
Sbjct: 176 GARWFVMGDDDTVFFPDNLVDVLSRYDHTQPYYIGNPS--------ESHIQNLIFSYGMA 227
Query: 756 TGGAGFCI 779
GG GF I
Sbjct: 228 FGGGGFAI 235
>10_08_0748 - 20277623-20277736,20277956-20279425
Length = 527
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/68 (35%), Positives = 31/68 (45%)
Frame = +3
Query: 576 GKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFA 755
G +WF DDD LV VL Y H++ +Y+G S L+FS+ A
Sbjct: 199 GVRWFVMGDDDTVFLPENLVHVLSQYDHRQPYYIGSPS--------ESHIQNLIFSYGMA 250
Query: 756 TGGAGFCI 779
GG GF I
Sbjct: 251 FGGGGFAI 258
>04_04_0895 - 29168107-29168229,29168617-29170068
Length = 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +3
Query: 576 GKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFA 755
G +WF DDD L++VL + H++ +Y+G S IY FS+ A
Sbjct: 187 GVRWFVMGDDDTVFFPDNLLTVLNKFDHRQPYYIGSLSESHLQNIY--------FSYGMA 238
Query: 756 TGGAGFCI 779
GG GF I
Sbjct: 239 YGGGGFAI 246
>02_05_0315 - 27822379-27823899
Length = 506
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +3
Query: 573 SGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWF 752
SG +W+ DDD LV+VLQ H++ +Y+G S + FS+
Sbjct: 182 SGVRWYVMGDDDTVFLPDNLVAVLQKLDHRQPYYIGYPS--------ESHLQNIFFSYGM 233
Query: 753 ATGGAGFCI 779
A GG GF I
Sbjct: 234 AFGGGGFAI 242
>03_02_0505 +
8981856-8982879,8983014-8983129,8985407-8985994,
8986091-8986192
Length = 609
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +3
Query: 582 KWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFATG 761
+WF DDD LV+VL Y H+E +Y+G S E V+ +M S+ A G
Sbjct: 193 RWFVMGDDDTVFFPDNLVAVLNKYDHEEMYYVGAPS--ESVE------QDVMHSYGMAFG 244
Query: 762 GAGFCI 779
G GF +
Sbjct: 245 GGGFAV 250
>03_02_0503 + 8951824-8952642,8953159-8953770,8953938-8954042
Length = 511
Score = 35.5 bits (78), Expect = 0.048
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +3
Query: 582 KWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFATG 761
+W DDD LV+VL Y H+E +Y+G TS E V ++ S+ A G
Sbjct: 168 RWLVMGDDDTVFFPENLVAVLDKYDHREMYYVGSTS--ESV------GQNVVHSYSMAFG 219
Query: 762 GAGFCI 779
G G+ I
Sbjct: 220 GGGYAI 225
>02_03_0414 - 18792830-18793126,18793131-18793232,18793454-18793753
Length = 232
Score = 34.7 bits (76), Expect = 0.084
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 585 WFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFATGG 764
WF DDD +V+VL + H + +Y+G S E V+ +M S+ A GG
Sbjct: 171 WFVMGDDDTVFFPDNMVAVLNKFDHAKTYYIGAPS--ESVE------QDVMHSYSMAFGG 222
Query: 765 AGFCI 779
GF I
Sbjct: 223 GGFAI 227
>08_01_0256 + 2102044-2102883,2104208-2104741,2104838-2104945
Length = 493
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 582 KWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTS 689
+W DDD +P L+ L Y +E WYLG S
Sbjct: 175 RWLVLADDDTAFVLPNLLHTLSRYDWREPWYLGARS 210
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +3
Query: 576 GKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPTNKLMFSFWFA 755
G +W DDD V+ LV+VL Y +E Y+G S Y FS A
Sbjct: 191 GARWVVLVDDDTVVSADNLVAVLGKYDWREMVYVGAPSESHSANTY--------FSHSMA 242
Query: 756 TGGAGFCI 779
GG G +
Sbjct: 243 FGGGGVAL 250
>05_03_0343 +
12732673-12732792,12732903-12733091,12733220-12733387,
12733468-12733522,12733646-12733704,12734784-12734909,
12737281-12737409,12737486-12737540,12737633-12737808,
12737903-12737986,12738602-12738625
Length = 394
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 289 VMGSIDRSATCTTPARLSWKLKLTPPWYTNKLQYPKANSTAAA--LSILRPPIPKQTGAK 116
+ G+IDRS P+ + TPP + + Y + A +L PP P QT +
Sbjct: 52 ISGTIDRSKAAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQ 111
Query: 115 TPI 107
TP+
Sbjct: 112 TPL 114
>02_03_0134 - 15596379-15597689
Length = 436
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/65 (23%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 216 GVNFNFQESRAGV--VQVADLSIEPITKTSVDDIELNKNITLNDIFISVKTTKHYQYTRL 389
G+N Q + + ++ + + E K +VD+ ELN+ ++ ++++ V TTK+ +
Sbjct: 309 GINSKVQAVKEAIDNSELKEAANETELKEAVDETELNEVVSESELYKDVNTTKYTEDALE 368
Query: 390 PIILK 404
P++++
Sbjct: 369 PMLIE 373
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +2
Query: 89 PRLSR--AYRRFGASLLWNGRTKNA*GRSCAVSLRILQLISIPRRSQLQLPRKSGRCCA 259
P LS YR A L+WNG K C++ L Q S R + PR CC+
Sbjct: 392 PSLSHILTYRSASARLIWNGPHKYCDQSKCSLPL-WHQSTSATRTNSAVTPRALSLCCS 449
>01_07_0118 + 41176159-41178909
Length = 916
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 561 GHIQRTFCSINVYVGATQSNLYSPCGHL 478
GH+ R NV++ A+ ++YS CG L
Sbjct: 696 GHVVRFGLQTNVFISASLVDMYSKCGRL 723
>04_04_1558 -
34417801-34417920,34418930-34419051,34419458-34419531,
34419736-34419819,34419945-34420080,34420806-34420836,
34421228-34421386,34422375-34422595,34422685-34422898
Length = 386
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 158 KHSSSAHSKADWRQNADTLAKASALFRSSVV 66
+H +++H+K W Q D + K +L +S +V
Sbjct: 211 EHQANSHAKKGWEQFTDAVIKTISLKKSGIV 241
>02_01_0498 - 3614621-3614674,3614780-3617161
Length = 811
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 618 LRSCRRQSDRTIFYHSRET-GHIQRTFCSINVYVGATQSNLYSPCGHLSD 472
+ SC R S H R+ + + NVYVG+ ++Y+ CG++ D
Sbjct: 525 INSCSRLSS---IPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDD 571
>01_06_0084 + 26286463-26288259
Length = 598
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = -1
Query: 531 NVYVGATQSNLYSPCGHLSD 472
+V+VG++ ++Y+ CGHL+D
Sbjct: 160 DVFVGSSVLDMYAKCGHLAD 179
>07_01_1052 -
9234506-9235037,9235148-9235849,9236169-9236313,
9236478-9237069
Length = 656
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3
Query: 256 TTPARLSWKLKLTPPWYTNKLQYPKANSTAAALSILRPPIPKQTGAKTP 110
T P WK + PP KL+ P T +A PIPK+ + P
Sbjct: 145 TMPRNRYWKTPVKPPIPAKKLEQPAQKKTQSA------PIPKKVWREKP 187
>05_04_0248 - 19363567-19363814,19363900-19364092,19364202-19364846
Length = 361
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 291 KTSVDDIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKE 428
K V D+E KNI +N I + T+K + +L+ W+ +E
Sbjct: 192 KRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 237
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,904,689
Number of Sequences: 37544
Number of extensions: 396462
Number of successful extensions: 1269
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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