BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J13
(783 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 29 0.21
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 25 2.0
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 25 3.5
AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding pr... 24 6.1
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 6.1
AJ618927-1|CAF02006.1| 235|Anopheles gambiae odorant-binding pr... 24 6.1
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 6.1
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 0.21
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 617 KCPSFGERATNLQAPRRLVSRQNVCLRAGQ 706
+C G A + ++P V RQNVC+R GQ
Sbjct: 553 RCLEHGHNARDCRSP---VDRQNVCIRCGQ 579
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 25.4 bits (53), Expect = 2.0
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 213 GGVNFNFQESRAGVVQVADLSIEPITKTSVDDIELNKNITLNDIFI-SVKTTKHYQYT 383
GG F + V+ D SI +T S D + + + + S K +HYQYT
Sbjct: 279 GGFLIVFMKRAGYPVRPFDFSIPGVTSISADTHKYGFTPKGSSVILYSEKVYRHYQYT 336
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 24.6 bits (51), Expect = 3.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 602 RRQLRKCPSFGERATNLQAPRRLVSRQNVCLRAG 703
R++ +C G A+N R RQN+C+R G
Sbjct: 505 RQRCFRCLEMGHIASNC---RSTADRQNLCIRCG 535
>AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding
protein AgamOBP56 protein.
Length = 181
Score = 23.8 bits (49), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 118 WRQSALEWADEECLRPQLCC 177
+R+SA E D++C R CC
Sbjct: 17 FRRSASEVQDDKCKRKYKCC 36
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 23.8 bits (49), Expect = 6.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 337 FKVMFLFSSISSTLVLVMGSIDRSATCTTPAR 242
FK+ +FS ST VLV+ +DR P +
Sbjct: 259 FKLCQMFSLYLSTYVLVLVGVDRWVAVKYPMK 290
>AJ618927-1|CAF02006.1| 235|Anopheles gambiae odorant-binding
protein OBPjj7a protein.
Length = 235
Score = 23.8 bits (49), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 118 WRQSALEWADEECLRPQLCC 177
+R+SA E D++C R CC
Sbjct: 45 FRRSASEVQDDKCKRKYKCC 64
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 23.8 bits (49), Expect = 6.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 337 FKVMFLFSSISSTLVLVMGSIDRSATCTTPAR 242
FK+ +FS ST VLV+ +DR P +
Sbjct: 260 FKLCQMFSLYLSTYVLVLVGVDRWVAVKYPMK 291
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,374
Number of Sequences: 2352
Number of extensions: 16065
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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