Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J13
(783 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF193612-1|AAF07187.1| 258|Homo sapiens fringe protein protein. 169 1e-41
U94354-1|AAC51360.1| 257|Homo sapiens lunatic fringe protein. 167 3e-41
Z93096-1|CAB07511.1| 321|Homo sapiens manic fringe homolog (Dro... 157 3e-38
CR456518-1|CAG30404.1| 321|Homo sapiens MFNG protein. 157 3e-38
BC094814-1|AAH94814.1| 321|Homo sapiens MFNG O-fucosylpeptide 3... 157 3e-38
U94352-1|AAC51358.1| 321|Homo sapiens manic fringe precursor pr... 155 2e-37
AF108139-1|AAD34321.1| 191|Homo sapiens radical fringe protein. 144 2e-34
BC014851-1|AAH14851.1| 250|Homo sapiens LFNG protein protein. 136 6e-32
AK094016-1|BAC04269.1| 197|Homo sapiens protein ( Homo sapiens ... 78 3e-14
U94353-1|AAC51359.1| 191|Homo sapiens radical fringe protein. 71 4e-12
AL138965-2|CAH73049.2| 498|Homo sapiens beta 1,3-galactosyltran... 46 1e-04
AL137142-6|CAI12432.2| 498|Homo sapiens beta 1,3-galactosyltran... 46 1e-04
BC146805-1|AAI46806.1| 233|Homo sapiens RFNG protein protein. 46 2e-04
BC068595-1|AAH68595.1| 498|Homo sapiens beta 1,3-galactosyltran... 45 4e-04
AY190526-1|AAO37647.1| 498|Homo sapiens beta3-glycosyltransfera... 45 4e-04
AB101481-1|BAD13528.1| 498|Homo sapiens glucosyltransferase pro... 45 4e-04
BC046247-1|AAH46247.1| 802|Homo sapiens carbohydrate (chondroit... 44 6e-04
AY358529-1|AAQ88893.1| 802|Homo sapiens CHSY1 protein. 44 6e-04
AB071402-1|BAB64936.1| 802|Homo sapiens chondroitin synthase pr... 44 6e-04
AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein. 44 6e-04
AY124582-1|AAM93542.1| 144|Homo sapiens lunatic fringe protein. 38 0.054
BC064509-1|AAH64509.1| 666|Homo sapiens CSGlcA-T protein protein. 33 0.88
AY358407-1|AAQ88773.1| 772|Homo sapiens RLSS299 protein. 33 0.88
AB086062-1|BAC98832.1| 882|Homo sapiens chondroitin sulfate syn... 33 0.88
AB037823-1|BAA92640.1| 788|Homo sapiens KIAA1402 protein protein. 33 0.88
BC003174-1|AAH03174.1| 285|Homo sapiens C1GALT1 protein protein. 32 2.0
AJ578034-1|CAE17326.1| 882|Homo sapiens chodroitin synthase 2 p... 32 2.0
AJ278960-1|CAC82373.1| 363|Homo sapiens beta 1,3-galactosyltran... 32 2.0
AJ243256-1|CAC80435.1| 363|Homo sapiens beta-1,3-Galactosyltran... 32 2.0
AJ132443-1|CAC45046.1| 309|Homo sapiens beta-1,3-galactosyltran... 32 2.0
AF155582-1|AAF81981.1| 363|Homo sapiens core1 UDP-galactose:N-a... 32 2.0
AC005532-1|AAQ96887.1| 363|Homo sapiens unknown protein. 32 2.0
AB175496-1|BAF47165.1| 882|Homo sapiens chondroitin synthase-2 ... 32 2.0
>AF193612-1|AAF07187.1| 258|Homo sapiens fringe protein protein.
Length = 258
Score = 169 bits (411), Expect = 1e-41
Identities = 78/149 (52%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
Frame = +3
Query: 339 DIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASH 518
D+FI+VKTTK + RL ++L+TW KE T+ FTD E + T G++V TNCSA+H
Sbjct: 11 DVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHT-GNVVITNCSAAH 69
Query: 519 QRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYE 698
R+ L CKM+VEYDRF+ESG+KWFCH DDDNYVN+ L+ +L +Y H D Y+G+ S+
Sbjct: 70 SRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDR 129
Query: 699 PVKIYXKPT-NKLM-FSFWFATGGAGFCI 779
P++ + + NK+ FWFATGGAGFCI
Sbjct: 130 PIQAMERVSENKVRPVHFWFATGGAGFCI 158
>U94354-1|AAC51360.1| 257|Homo sapiens lunatic fringe protein.
Length = 257
Score = 167 bits (407), Expect = 3e-41
Identities = 78/149 (52%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
Frame = +3
Query: 339 DIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASH 518
D+FI+VKTTK + RL ++L+TW KE T+ FTD E + T G++V TNCSA+H
Sbjct: 10 DVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHT-GNVVITNCSAAH 68
Query: 519 QRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYE 698
R+ L CKM+VEYDRF+ESG+KWFCH DDDNYVN+ L+ +L +Y H D Y+G+ S+
Sbjct: 69 SRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLLLLASYPHTLDVYVGKPSLDR 128
Query: 699 PVKIYXKPT-NKLM-FSFWFATGGAGFCI 779
P++ + + NK+ FWFATGGAGFCI
Sbjct: 129 PIQAMERVSENKVRPVHFWFATGGAGFCI 157
>Z93096-1|CAB07511.1| 321|Homo sapiens manic fringe homolog
(Drosophila) protein.
Length = 321
Score = 157 bits (382), Expect = 3e-38
Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Frame = +3
Query: 327 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 506
+ L+D+FI+VKTT+ + RL ++L TW +EQT+ FTD+ K Q + H+V TNC
Sbjct: 51 LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNC 110
Query: 507 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRT 686
SA H L CKM+ E+D FL SG +WFCH DDDNYVN L+ +L+ + D Y+GR
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRP 170
Query: 687 SVYEPVKIYX-KPTNKL-MFSFWFATGGAGFCI 779
S+ P+ +P N+ + FWFATGGAGFCI
Sbjct: 171 SLNRPIHASEPQPHNRTRLVQFWFATGGAGFCI 203
>CR456518-1|CAG30404.1| 321|Homo sapiens MFNG protein.
Length = 321
Score = 157 bits (382), Expect = 3e-38
Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Frame = +3
Query: 327 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 506
+ L+D+FI+VKTT+ + RL ++L TW +EQT+ FTD+ K Q + H+V TNC
Sbjct: 51 LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNC 110
Query: 507 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRT 686
SA H L CKM+ E+D FL SG +WFCH DDDNYVN L+ +L+ + D Y+GR
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRP 170
Query: 687 SVYEPVKIYX-KPTNKL-MFSFWFATGGAGFCI 779
S+ P+ +P N+ + FWFATGGAGFCI
Sbjct: 171 SLNRPIHASEPQPHNRTRLVQFWFATGGAGFCI 203
>BC094814-1|AAH94814.1| 321|Homo sapiens MFNG O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase protein.
Length = 321
Score = 157 bits (382), Expect = 3e-38
Identities = 72/153 (47%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Frame = +3
Query: 327 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 506
+ L+D+FI+VKTT+ + RL ++L TW +EQT+ FTD+ K Q + H+V TNC
Sbjct: 51 LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNC 110
Query: 507 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRT 686
SA H L CKM+ E+D FL SG +WFCH DDDNYVN L+ +L+ + D Y+GR
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRP 170
Query: 687 SVYEPVKIYX-KPTNKL-MFSFWFATGGAGFCI 779
S+ P+ +P N+ + FWFATGGAGFCI
Sbjct: 171 SLNRPIHASEPQPHNRTRLVQFWFATGGAGFCI 203
>U94352-1|AAC51358.1| 321|Homo sapiens manic fringe precursor
protein.
Length = 321
Score = 155 bits (375), Expect = 2e-37
Identities = 71/153 (46%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Frame = +3
Query: 327 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 506
+ L+D+FI+VKTT+ + RL ++L TW +E T+ FTD+ K Q + H+V TNC
Sbjct: 51 LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTRELTFVFTDSPDKGLQERLGSHLVVTNC 110
Query: 507 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRT 686
SA H L CKM+ E+D FL SG +WFCH DDDNYVN L+ +L+ + D Y+GR
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRP 170
Query: 687 SVYEPVKIYX-KPTNKL-MFSFWFATGGAGFCI 779
S+ P+ +P N+ + FWFATGGAGFCI
Sbjct: 171 SLNRPIHASEPQPHNRTRLVQFWFATGGAGFCI 203
>AF108139-1|AAD34321.1| 191|Homo sapiens radical fringe protein.
Length = 191
Score = 144 bits (350), Expect = 2e-34
Identities = 61/124 (49%), Positives = 88/124 (70%)
Frame = +3
Query: 336 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 515
+D+FI+VKTT+ RL ++L+TW A++QT+ FTD + + + Q ++NTNCSA
Sbjct: 58 DDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQGGDRVINTNCSAV 117
Query: 516 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVY 695
R+ LCCKMSVEYD+F+ESG+KWFCH DDDNYVN L+ +L ++ +D YLGR S+
Sbjct: 118 RTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLD 177
Query: 696 EPVK 707
P++
Sbjct: 178 HPIE 181
>BC014851-1|AAH14851.1| 250|Homo sapiens LFNG protein protein.
Length = 250
Score = 136 bits (330), Expect = 6e-32
Identities = 63/119 (52%), Positives = 85/119 (71%), Gaps = 2/119 (1%)
Frame = +3
Query: 429 QTWFFTDTETKQHQNQTNGHMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDD 608
+T+ FTD E + T G++V TNCSA+H R+ L CKM+VEYDRF+ESG+KWFCH DDD
Sbjct: 15 ETFIFTDGEDEALARHT-GNVVITNCSAAHSRQALSCKMAVEYDRFIESGRKWFCHVDDD 73
Query: 609 NYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXKPT-NKLM-FSFWFATGGAGFCI 779
NYVN+ L+ +L +Y H D Y+G+ S+ P++ + + NK+ FWFATGGAGFCI
Sbjct: 74 NYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENKVRPVHFWFATGGAGFCI 132
>AK094016-1|BAC04269.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ36697 fis, clone UTERU2008962, moderately
similar to Homo sapiens radical fringe (RFNG) gene. ).
Length = 197
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +3
Query: 543 MSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVK 707
MSVEYD+F+ESG+KWFCH DDDNYVN L+ +L ++ +D YLGR S+ P++
Sbjct: 1 MSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIE 55
>U94353-1|AAC51359.1| 191|Homo sapiens radical fringe protein.
Length = 191
Score = 71.3 bits (167), Expect = 4e-12
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 585 WFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKIYXK---PTNKLMFSFWFA 755
WFCH DDDNYVN L+ +L ++ +D YLGR S+ P++ + FWFA
Sbjct: 1 WFCHVDDDNYVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATERVQGGRTVTTVKFWFA 60
Query: 756 TGGAGFCI 779
TGGAGFC+
Sbjct: 61 TGGAGFCL 68
>AL138965-2|CAH73049.2| 498|Homo sapiens beta
1,3-galactosyltransferase-like protein.
Length = 498
Score = 46.4 bits (105), Expect = 1e-04
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +3
Query: 321 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 500
K + DIF++VKT K + R+PI+ +TW A ++ TE + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319
Query: 501 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDNYVNVPRLVSVLQTYKHQEDW 671
+ R H C K +RFL + W DDD +++ RL +L Y E
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPV 372
Query: 672 YLGRTSVY 695
+LG Y
Sbjct: 373 FLGERYGY 380
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 546 SVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKI---YX 716
SV Y R W +++ + +P+L+ L+ Y ++W+LG+ E I Y
Sbjct: 118 SVTYSR----NSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYA 173
Query: 717 KPTNKLMFSF-WFATGGA 767
N +F + FA G A
Sbjct: 174 FSENPTVFKYPDFAAGWA 191
>AL137142-6|CAI12432.2| 498|Homo sapiens beta
1,3-galactosyltransferase-like protein.
Length = 498
Score = 46.4 bits (105), Expect = 1e-04
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +3
Query: 321 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 500
K + DIF++VKT K + R+PI+ +TW A ++ TE + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319
Query: 501 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDNYVNVPRLVSVLQTYKHQEDW 671
+ R H C K +RFL + W DDD +++ RL +L Y E
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPV 372
Query: 672 YLGRTSVY 695
+LG Y
Sbjct: 373 FLGERYGY 380
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 546 SVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKI---YX 716
SV Y R W +++ + +P+L+ L+ Y ++W+LG+ E I Y
Sbjct: 118 SVTYSR----NSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYA 173
Query: 717 KPTNKLMFSF-WFATGGA 767
N +F + FA G A
Sbjct: 174 FSENPTVFKYPDFAAGWA 191
>BC146805-1|AAI46806.1| 233|Homo sapiens RFNG protein protein.
Length = 233
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 336 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQ 476
+D+FI+VKTT+ RL ++L+TW A++QT+ FTD + + + Q
Sbjct: 58 DDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQ 104
>BC068595-1|AAH68595.1| 498|Homo sapiens beta
1,3-galactosyltransferase-like protein.
Length = 498
Score = 44.8 bits (101), Expect = 4e-04
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +3
Query: 321 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 500
K + DIF++VKT K + R+PI+ +TW A ++ TE + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRMPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319
Query: 501 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDNYVNVPRLVSVLQTYKHQEDW 671
+ R H C K +RFL + W DDD +++ RL +L Y +
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGKPV 372
Query: 672 YLGRTSVY 695
+LG Y
Sbjct: 373 FLGERYGY 380
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 546 SVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKI---YX 716
SV Y R W +++ + +P+L+ L+ Y ++W+LG+ E I Y
Sbjct: 118 SVTYSR----NSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYA 173
Query: 717 KPTNKLMFSF-WFATGGA 767
N +F + FA G A
Sbjct: 174 FSENPTVFKYPDFAAGWA 191
>AY190526-1|AAO37647.1| 498|Homo sapiens
beta3-glycosyltransferase-like protein.
Length = 498
Score = 44.8 bits (101), Expect = 4e-04
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +3
Query: 321 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 500
K + DIF++VKT K + R+PI+ +TW A ++ TE + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319
Query: 501 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDNYVNVPRLVSVLQTYKHQEDW 671
+ R H C K +RFL + W DDD +++ RL +L Y +
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGKPV 372
Query: 672 YLGRTSVY 695
+LG Y
Sbjct: 373 FLGERYGY 380
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 546 SVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKI---YX 716
SV Y R W +++ + +P+L+ L+ Y ++W+LG+ E I Y
Sbjct: 118 SVTYSR----NSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYA 173
Query: 717 KPTNKLMFSF-WFATGGA 767
N +F + FA G A
Sbjct: 174 FSENPTVFKYPDFAAGWA 191
>AB101481-1|BAD13528.1| 498|Homo sapiens glucosyltransferase
protein.
Length = 498
Score = 44.8 bits (101), Expect = 4e-04
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +3
Query: 321 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 500
K + DIF++VKT K + R+PI+ +TW A ++ TE + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319
Query: 501 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDNYVNVPRLVSVLQTYKHQEDW 671
+ R H C K +RFL + W DDD +++ RL +L Y +
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGKPV 372
Query: 672 YLGRTSVY 695
+LG Y
Sbjct: 373 FLGERYGY 380
Score = 33.1 bits (72), Expect = 1.2
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 546 SVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVYEPVKI---YX 716
SV Y R W +++ + +P+L+ L+ Y ++W+LG+ E I Y
Sbjct: 118 SVTYSR----NSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYA 173
Query: 717 KPTNKLMFSF-WFATGGA 767
N +F + FA G A
Sbjct: 174 FSENPTVFKYPDFAAGWA 191
>BC046247-1|AAH46247.1| 802|Homo sapiens carbohydrate (chondroitin)
synthase 1 protein.
Length = 802
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/119 (24%), Positives = 52/119 (43%)
Frame = +3
Query: 336 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 515
N +F+ V T + Y TR +TW + + FF+ + + + S
Sbjct: 85 NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 144
Query: 516 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSV 692
Q+K + +D +L+ +WF DDD Y+ RL + L++ E +LG+T +
Sbjct: 145 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGL 201
>AY358529-1|AAQ88893.1| 802|Homo sapiens CHSY1 protein.
Length = 802
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/119 (24%), Positives = 52/119 (43%)
Frame = +3
Query: 336 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 515
N +F+ V T + Y TR +TW + + FF+ + + + S
Sbjct: 85 NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 144
Query: 516 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSV 692
Q+K + +D +L+ +WF DDD Y+ RL + L++ E +LG+T +
Sbjct: 145 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGL 201
>AB071402-1|BAB64936.1| 802|Homo sapiens chondroitin synthase
protein.
Length = 802
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/119 (24%), Positives = 52/119 (43%)
Frame = +3
Query: 336 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 515
N +F+ V T + Y TR +TW + + FF+ + + + S
Sbjct: 85 NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 144
Query: 516 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSV 692
Q+K + +D +L+ +WF DDD Y+ RL + L++ E +LG+T +
Sbjct: 145 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGL 201
>AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein.
Length = 883
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/119 (24%), Positives = 52/119 (43%)
Frame = +3
Query: 336 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 515
N +F+ V T + Y TR +TW + + FF+ + + + S
Sbjct: 166 NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 225
Query: 516 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSV 692
Q+K + +D +L+ +WF DDD Y+ RL + L++ E +LG+T +
Sbjct: 226 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGL 282
>AY124582-1|AAM93542.1| 144|Homo sapiens lunatic fringe protein.
Length = 144
Score = 37.5 bits (83), Expect = 0.054
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 339 DIFISVKTTKHYQYTRLPIILKTWFQLAKE 428
D+FI+VKTTK + RL ++L+TW KE
Sbjct: 114 DVFIAVKTTKKFHRARLDLLLETWISRHKE 143
>BC064509-1|AAH64509.1| 666|Homo sapiens CSGlcA-T protein protein.
Length = 666
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 585 WFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVY 695
WF DD YV PRL ++ +D YLGR +
Sbjct: 177 WFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRAEEF 213
>AY358407-1|AAQ88773.1| 772|Homo sapiens RLSS299 protein.
Length = 772
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 585 WFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVY 695
WF DD YV PRL ++ +D YLGR +
Sbjct: 177 WFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRAEEF 213
>AB086062-1|BAC98832.1| 882|Homo sapiens chondroitin sulfate
synthase protein.
Length = 882
Score = 33.5 bits (73), Expect = 0.88
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +3
Query: 342 IFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMV----NTNCS 509
+++ V T + Y +R +TW + + FF+ + V + S
Sbjct: 173 LYVGVMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQPPNAGQPPPPLPVIALPGVDDS 232
Query: 510 ASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTS 689
Q+K + +D +L+ +WF DDD Y+ +L L++ + YLG+T
Sbjct: 233 YPPQKKSFMM-IKYMHDHYLDK-YEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTG 290
Query: 690 V 692
+
Sbjct: 291 L 291
>AB037823-1|BAA92640.1| 788|Homo sapiens KIAA1402 protein protein.
Length = 788
Score = 33.5 bits (73), Expect = 0.88
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 585 WFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSVY 695
WF DD YV PRL ++ +D YLGR +
Sbjct: 193 WFFIMQDDTYVQAPRLAALAGHLSINQDLYLGRAEEF 229
>BC003174-1|AAH03174.1| 285|Homo sapiens C1GALT1 protein protein.
Length = 285
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGR 683
++ +LE WF DDD YV + L +L Y +E Y GR
Sbjct: 77 HEHYLEDAD-WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 118
>AJ578034-1|CAE17326.1| 882|Homo sapiens chodroitin synthase 2
protein.
Length = 882
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSV 692
+D +L+ +WF DDD Y+ +L L++ + YLG+T +
Sbjct: 247 HDHYLDK-YEWFMRADDDVYIKEDKLEEFLRSLNSSKPLYLGQTGL 291
>AJ278960-1|CAC82373.1| 363|Homo sapiens beta
1,3-galactosyltransferase protein.
Length = 363
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGR 683
++ +LE WF DDD YV + L +L Y +E Y GR
Sbjct: 155 HEHYLEDAD-WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196
>AJ243256-1|CAC80435.1| 363|Homo sapiens
beta-1,3-Galactosyltransferase protein.
Length = 363
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGR 683
++ +LE WF DDD YV + L +L Y +E Y GR
Sbjct: 155 HEHYLEDAD-WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196
>AJ132443-1|CAC45046.1| 309|Homo sapiens
beta-1,3-galactosyltransferase b3Gal-T8 protein.
Length = 309
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGR 683
++ +LE WF DDD YV + L +L Y +E Y GR
Sbjct: 155 HEHYLEDAD-WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196
>AF155582-1|AAF81981.1| 363|Homo sapiens core1
UDP-galactose:N-acetylgalactosamine-alpha-R beta
1,3-galactosyltransferas protein.
Length = 363
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGR 683
++ +LE WF DDD YV + L +L Y +E Y GR
Sbjct: 155 HEHYLEDAD-WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196
>AC005532-1|AAQ96887.1| 363|Homo sapiens unknown protein.
Length = 363
Score = 32.3 bits (70), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGR 683
++ +LE WF DDD YV + L +L Y +E Y GR
Sbjct: 155 HEHYLEDAD-WFLKADDDTYVILDNLRWLLSKYDPEEPIYFGR 196
>AB175496-1|BAF47165.1| 882|Homo sapiens chondroitin synthase-2
protein.
Length = 882
Score = 32.3 bits (70), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 555 YDRFLESGKKWFCHFDDDNYVNVPRLVSVLQTYKHQEDWYLGRTSV 692
+D +L+ +WF DDD Y+ +L L++ + YLG+T +
Sbjct: 247 HDHYLDK-YEWFMRADDDVYIKEDKLEEFLRSLNSSKPLYLGQTGL 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,546,932
Number of Sequences: 237096
Number of extensions: 2182787
Number of successful extensions: 12740
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12720
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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