Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J10
(866 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 1.6
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 3.6
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 4.8
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 4.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 8.4
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 499 TSTELKNALR---SIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRT 633
T+T+ ++ R S DL+DLE+ ++ ++ N+ +I + I + T
Sbjct: 266 TNTDARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHT 313
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 345 VKCKQRRVAKRSAVRNRRGLISG 277
++ + R++ ++RNR GL+SG
Sbjct: 370 IELQDLRMSPLPSIRNRSGLVSG 392
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 106 VLVTYSYI-LCSNTSSRVKKVTKPKLNSERREATR 207
+L T S + LC+ + R VT+P + S RR + R
Sbjct: 120 LLCTASILSLCAISIDRYLAVTQPLIYSRRRRSKR 154
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -3
Query: 279 GRENSQQTLLRFT-PQ*PHTINLLPPRC 199
G NS+ F PQ P+T+ PRC
Sbjct: 129 GTGNSRANTYNFDYPQVPYTVKNFHPRC 156
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.4
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 592 KFKIDNKEICDRRTFIEATKQEVKNMKSKMSLNRNRDNDGTAREPLLGDDSPMNFGNNWT 771
K++ +KE RT E +K E K + + SL+ N + + N+ NN+
Sbjct: 58 KYRETSKERSRNRTERERSK-EPKIISNNNSLSNNYNYNNNYN----------NYNNNYN 106
Query: 772 STPKYTKYSKLXNQPTVPI 828
+ K +Y + N +P+
Sbjct: 107 TNYKKLQYYNIINIEQIPV 125
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.4
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 751 NFGNNWTSTPKYTKYSKLXNQPTVPI 828
N+ NN+ + K +Y + N +P+
Sbjct: 96 NYNNNYNTNYKKLQYYNIINIEQIPV 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 579 LYNTYCIF*IFQIPFNAAQCIFQFSRSPF 493
+Y + C + PF+ CI +F F
Sbjct: 146 IYQSSCTIDVTYFPFDQQTCIMKFGSWTF 174
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,254
Number of Sequences: 438
Number of extensions: 4593
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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