Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J07
         (854 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    24   5.1  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   6.8  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   9.0  

>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 630 FRHNSHLKTIRWKFLESLEPPRVVHAR 710
           FR+N  L+T R +      PPR V  R
Sbjct: 36  FRYNRRLRTARLRRYIFQSPPRAVRVR 62


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 573 VNNDKRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVV 701
           V++ + ALRL +  +   +   +  + TI    +E  EPP VV
Sbjct: 81  VHDHRYALRLLLETQKSEDVESSIPVSTIEPNLVEVYEPPPVV 123


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 435 QTVELLEKKSKSMMAIRKIKSFDEDY 512
           Q VEL E+ SKS++A   +   D+D+
Sbjct: 388 QDVELKERSSKSLLA--NVLDIDDDF 411


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,837
Number of Sequences: 2352
Number of extensions: 18373
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)