Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J04
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. 279 8e-75
BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. 279 8e-75
AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens ... 279 8e-75
AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. 279 8e-75
AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. 277 3e-74
BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. 240 4e-63
AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens ... 32 2.5
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 32 2.5
>BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 279 bits (684), Expect = 8e-75
Identities = 133/201 (66%), Positives = 155/201 (77%)
Frame = +2
Query: 143 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 322
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 323 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 502
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 503 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 682
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 683 SKFAKAYSEGVHKSXYWEYVY 745
S FA+AY++G+ ++ YWE +Y
Sbjct: 179 SNFARAYAQGISRTKYWELIY 199
>BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein.
Length = 466
Score = 279 bits (684), Expect = 8e-75
Identities = 133/201 (66%), Positives = 155/201 (77%)
Frame = +2
Query: 143 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 322
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 323 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 502
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 503 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 682
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 683 SKFAKAYSEGVHKSXYWEYVY 745
S FA+AY++G+ ++ YWE +Y
Sbjct: 179 SNFARAYAQGISRTKYWELIY 199
>AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to
Porcine citrate synthase mRNA. ).
Length = 466
Score = 279 bits (684), Expect = 8e-75
Identities = 133/201 (66%), Positives = 155/201 (77%)
Frame = +2
Query: 143 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 322
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 323 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 502
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 503 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 682
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 683 SKFAKAYSEGVHKSXYWEYVY 745
S FA+AY++G+ ++ YWE +Y
Sbjct: 179 SNFARAYAQGISRTKYWELIY 199
>AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 279 bits (684), Expect = 8e-75
Identities = 133/201 (66%), Positives = 155/201 (77%)
Frame = +2
Query: 143 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 322
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 323 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 502
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 503 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 682
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 683 SKFAKAYSEGVHKSXYWEYVY 745
S FA+AY++G+ ++ YWE +Y
Sbjct: 179 SNFARAYAQGISRTKYWELIY 199
>AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 277 bits (679), Expect = 3e-74
Identities = 133/201 (66%), Positives = 154/201 (76%)
Frame = +2
Query: 143 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 322
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 323 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 502
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 503 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 682
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGCIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 683 SKFAKAYSEGVHKSXYWEYVY 745
S FA+AY+ G+ ++ YWE +Y
Sbjct: 179 SNFAQAYARGISRTKYWELIY 199
>BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein.
Length = 409
Score = 240 bits (587), Expect = 4e-63
Identities = 109/142 (76%), Positives = 123/142 (86%)
Frame = +2
Query: 320 TKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPE 499
T VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPE
Sbjct: 1 TVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPE 60
Query: 500 GLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNS 679
GLFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNS
Sbjct: 61 GLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNS 120
Query: 680 ESKFAKAYSEGVHKSXYWEYVY 745
ES FA+AY++G+ ++ YWE +Y
Sbjct: 121 ESNFARAYAQGISRTKYWELIY 142
>AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ46675 fis, clone TRACH3009701, weakly similar
to Homo sapiens dynein, axonemal, heavy polypeptide 9
(DNAH9). ).
Length = 901
Score = 31.9 bits (69), Expect = 2.5
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 77 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 256
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 123 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 182
Query: 257 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 418
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 183 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 241
Query: 419 IRF 427
+ +
Sbjct: 242 LGY 244
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 31.9 bits (69), Expect = 2.5
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 77 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 256
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 3222 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 3281
Query: 257 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 418
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 3282 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 3340
Query: 419 IRF 427
+ +
Sbjct: 3341 LGY 3343
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,663,852
Number of Sequences: 237096
Number of extensions: 2190360
Number of successful extensions: 6855
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6854
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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