Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J02
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001409-1|AAH01409.1|  110|Homo sapiens transmembrane protein 9...   132   1e-30
BC110545-1|AAI10546.1| 1037|Homo sapiens huntingtin interacting ...    31   6.0  
AF365404-1|AAL87037.1| 1030|Homo sapiens huntingtin-interacting ...    31   6.0  

>BC001409-1|AAH01409.1|  110|Homo sapiens transmembrane protein 93
           protein.
          Length = 110

 Score =  132 bits (320), Expect = 1e-30
 Identities = 61/109 (55%), Positives = 81/109 (74%)
 Frame = +2

Query: 107 MSAVTKFKENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNGFAFYVF 286
           M+AV   +E  P     SEAA+R NA V++YCRTS++ALSG+TAG+LGLTGL GF FY+ 
Sbjct: 1   MAAVVAKREGPP---FISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLL 57

Query: 287 AVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGM 433
           A V+L ++ ++K G  W+KYF +R+ + T G  G LFTYVLFWTF+YGM
Sbjct: 58  ASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGM 106


>BC110545-1|AAI10546.1| 1037|Homo sapiens huntingtin interacting
           protein 1 protein.
          Length = 1037

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 75  EFNIRVYHTKGCLL*RNSKKTSQSLWLTVKQLSETMRWLSNTVVLLWQHC 224
           E  ++  H + C+L  + +K +Q+ W  V +L      LS+  VL W+ C
Sbjct: 52  EVAVKEKHARTCILGTHHEKGAQTFWSVVNRLP-----LSSNAVLCWKFC 96


>AF365404-1|AAL87037.1| 1030|Homo sapiens huntingtin-interacting
           protein 1 protein.
          Length = 1030

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 75  EFNIRVYHTKGCLL*RNSKKTSQSLWLTVKQLSETMRWLSNTVVLLWQHC 224
           E  ++  H + C+L  + +K +Q+ W  V +L      LS+  VL W+ C
Sbjct: 45  EVAVKEKHARTCILGTHHEKGAQTFWSVVNRLP-----LSSNAVLCWKFC 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,533,277
Number of Sequences: 237096
Number of extensions: 2015561
Number of successful extensions: 7877
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7876
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)