Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_J02
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119134-1|AAM50994.1|  113|Drosophila melanogaster RE35789p pro...   139   4e-33
AE014297-3686|AAF56378.1|  113|Drosophila melanogaster CG11781-P...   139   4e-33
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    31   1.7  
AY084161-1|AAL89899.1|  473|Drosophila melanogaster RE36938p pro...    29   9.1  
AE014297-2655|AAF55662.2|  473|Drosophila melanogaster CG3734-PA...    29   9.1  

>AY119134-1|AAM50994.1|  113|Drosophila melanogaster RE35789p
           protein.
          Length = 113

 Score =  139 bits (336), Expect = 4e-33
 Identities = 63/109 (57%), Positives = 78/109 (71%)
 Frame = +2

Query: 107 MSAVTKFKENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNGFAFYVF 286
           M+ V   +    E +AYSE A+RNN   VEYCRTSMAA+SG  AG+LGL+G  GF FY  
Sbjct: 1   MNRVKTTQSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLSGTLGFLFYFL 60

Query: 287 AVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGM 433
           +V +LWI+ LVK G  W K+FI R+++LTN F G L TYVLFWTF+YGM
Sbjct: 61  SVFVLWILVLVKSGTQWRKFFINRRNLLTNQFMGGLCTYVLFWTFLYGM 109


>AE014297-3686|AAF56378.1|  113|Drosophila melanogaster CG11781-PA
           protein.
          Length = 113

 Score =  139 bits (336), Expect = 4e-33
 Identities = 63/109 (57%), Positives = 78/109 (71%)
 Frame = +2

Query: 107 MSAVTKFKENKPEPVAYSEAALRNNAVVVEYCRTSMAALSGSTAGVLGLTGLNGFAFYVF 286
           M+ V   +    E +AYSE A+RNN   VEYCRTSMAA+SG  AG+LGL+G  GF FY  
Sbjct: 1   MNRVKTTQSKTGEIIAYSEGAIRNNISAVEYCRTSMAAISGCAAGILGLSGTLGFLFYFL 60

Query: 287 AVVMLWIMFLVKVGPHWSKYFITRQSVLTNGFFGALFTYVLFWTFIYGM 433
           +V +LWI+ LVK G  W K+FI R+++LTN F G L TYVLFWTF+YGM
Sbjct: 61  SVFVLWILVLVKSGTQWRKFFINRRNLLTNQFMGGLCTYVLFWTFLYGM 109


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
           protein.
          Length = 23015

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/81 (20%), Positives = 34/81 (41%)
 Frame = -2

Query: 397 K*CSKESICQNTLSGYKILAPMWSNFD*EHYPEHYNCKHVECKAIEPSETKNTCSGS*QC 218
           K C + ++C+NT+ GY    P    +D +  P+   C+ V+   +    +   C+ + +C
Sbjct: 506 KPCGQHAVCENTVPGYNCKCP--QGYDGKPDPK-VACEQVDVNIL--CSSNFDCTNNAEC 560

Query: 217 CHRSTTVFDNHRIVSESCFTV 155
                   D    +  SC  +
Sbjct: 561 IENQCFCLDGFEPIGSSCVDI 581



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -2

Query: 391 CSKESICQNTLSGYKILAPMWSNFD*EHYPEHYNCKHVECKAIEPSETKNTC 236
           C++++IC NT  GY    P  S+ D  +       K V C    P  T  TC
Sbjct: 838 CAEKAICSNTAGGYLCQCPGGSSGD-PYREGCITSKTVGCSDANPCATGETC 888


>AY084161-1|AAL89899.1|  473|Drosophila melanogaster RE36938p
           protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 326 GPHWSKYFITRQSVLTNGFFGALFTYV 406
           G  +S  FI+ Q  +TN FFG LF  V
Sbjct: 384 GSEYSNEFISNQVSITNQFFGGLFPNV 410


>AE014297-2655|AAF55662.2|  473|Drosophila melanogaster CG3734-PA
           protein.
          Length = 473

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 326 GPHWSKYFITRQSVLTNGFFGALFTYV 406
           G  +S  FI+ Q  +TN FFG LF  V
Sbjct: 384 GSEYSNEFISNQVSITNQFFGGLFPNV 410


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,274,093
Number of Sequences: 53049
Number of extensions: 592091
Number of successful extensions: 1780
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)