Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_J02
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 4.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 7.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 7.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.5
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 604 NLNTVHNLYLNKYLSNCKIV*YKYNWI 524
N N +N N Y +NCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 604 NLNTVHNLYLNKYLSNCKIV*YKYNWI 524
N N +N N Y +NCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 604 NLNTVHNLYLNKYLSNCKIV*YKYNWI 524
N N +N N Y +NCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 604 NLNTVHNLYLNKYLSNCKIV*YKYNWI 524
N N +N N Y +NCK + Y N+I
Sbjct: 93 NNNYKYNYNNNNYNNNCKKLYYNINYI 119
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.1
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 681 SPNKQLTVKKIQN-YQVHQCY 622
SP+KQLT+ +I N +Q CY
Sbjct: 520 SPDKQLTLNEIYNWFQNTFCY 540
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 595 TVHNL--YLNKYLSNCKIV*YKYNWI 524
T+HN Y Y +NCK + Y N+I
Sbjct: 89 TIHNNNNYKYNYNNNCKKLYYNINYI 114
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 427 WDGSCLLGYTS*SCYSIRGNKNIKYI 504
WD S G++S S +R N+N K +
Sbjct: 422 WDDSVSAGFSSSSNTWLRVNENYKTV 447
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 247 WSHWAQWLCILRVCSC 294
WSH WLC L C
Sbjct: 527 WSHVLGWLCGLSSMLC 542
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 247 WSHWAQWLCILRVCSC 294
WSH WLC L C
Sbjct: 580 WSHVLGWLCGLSSMLC 595
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 604 NLNTVHNLYLNKYLSNCKIV*Y 539
N N +N Y N Y +NCK + Y
Sbjct: 335 NNNYNNNNYNNNYNNNCKKLYY 356
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 427 WDGSCLLGYTS*SCYSIRGNKNIKYI 504
WD S G++S S +R N+N K +
Sbjct: 422 WDDSVSAGFSSSSNTWLRVNENYKTV 447
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 331 WSNFD*EHYPEHYNCKHVE 275
++N++ + P HYN ++E
Sbjct: 324 YNNYNNNYKPLHYNINYIE 342
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 159 VKQLSETMRWLSNTVVLLWQHCQDPLQVFLVSLGSMALHS 278
VK L + WL ++ Q + L+ G + +HS
Sbjct: 158 VKDLVRVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHS 197
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 159 VKQLSETMRWLSNTVVLLWQHCQDPLQVFLVSLGSMALHS 278
VK L + WL ++ Q + L+ G + +HS
Sbjct: 158 VKDLVRVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHS 197
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,275
Number of Sequences: 438
Number of extensions: 3936
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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