SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I21
         (813 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55A9A Cluster: PREDICTED: similar to Nuclear va...   115   1e-24
UniRef50_Q7Q5U3 Cluster: ENSANGP00000020514; n=2; Culicidae|Rep:...    80   8e-14
UniRef50_Q9VS62 Cluster: CG8571-PA, isoform A; n=5; Sophophora|R...    75   2e-12
UniRef50_Q803I9 Cluster: Nuclear VCP-like; n=4; Deuterostomia|Re...    63   9e-09
UniRef50_Q4TBC8 Cluster: Chromosome undetermined SCAF7151, whole...    41   0.032
UniRef50_Q9U8K0 Cluster: Cell survival CED-4-interacting protein...    41   0.032
UniRef50_UPI00005A22AF Cluster: PREDICTED: hypothetical protein ...    39   0.17 
UniRef50_A7ESG8 Cluster: Putative uncharacterized protein; n=1; ...    38   0.30 
UniRef50_O15381 Cluster: Nuclear valosin-containing protein-like...    37   0.70 
UniRef50_Q3MPK0 Cluster: Putative uncharacterized protein CaJ7.0...    36   0.92 
UniRef50_UPI0000584228 Cluster: PREDICTED: hypothetical protein;...    36   1.2  
UniRef50_UPI0000660479 Cluster: Nuclear valosin-containing prote...    36   1.2  
UniRef50_Q18TV8 Cluster: ATPase; n=3; Bacteria|Rep: ATPase - Des...    36   1.2  
UniRef50_Q17EV9 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q7KY09 Cluster: Trio; n=10; Diptera|Rep: Trio - Drosoph...    36   1.6  
UniRef50_Q03BV4 Cluster: Uncharacterized conserved membrane asso...    35   2.8  
UniRef50_Q93SC5 Cluster: RepF protein; n=2; Frankia|Rep: RepF pr...    34   3.7  
UniRef50_Q5BYA5 Cluster: SJCHGC04689 protein; n=1; Schistosoma j...    34   3.7  
UniRef50_Q54MH9 Cluster: Replication factor C subunit; n=1; Dict...    34   3.7  
UniRef50_A2ECB6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q8TL16 Cluster: Predicted protein; n=1; Methanosarcina ...    34   3.7  
UniRef50_A7FXA0 Cluster: Putative uncharacterized protein; n=2; ...    34   4.9  
UniRef50_Q9M261 Cluster: Putative uncharacterized protein F7M19_...    34   4.9  
UniRef50_A3BFF1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.9  
UniRef50_UPI000155612C Cluster: PREDICTED: similar to Janus kina...    33   6.5  
UniRef50_Q6EEU4 Cluster: Syntaxin 5-like protein; n=3; Entamoeba...    33   6.5  
UniRef50_A0DD16 Cluster: Chromosome undetermined scaffold_46, wh...    33   6.5  
UniRef50_Q968X7 Cluster: Pyruvate dehydrogenase [NADP+]; n=5; Cr...    33   6.5  
UniRef50_Q4UA33 Cluster: Putative uncharacterized protein; n=3; ...    33   8.6  
UniRef50_A2DGJ0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  
UniRef50_A0CBW4 Cluster: Chromosome undetermined scaffold_165, w...    33   8.6  
UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:...    33   8.6  
UniRef50_Q06SI4 Cluster: Chloroplast 30S ribosomal protein S3; n...    33   8.6  

>UniRef50_UPI0000D55A9A Cluster: PREDICTED: similar to Nuclear
           valosin-containing protein-like (Nuclear VCP-like
           protein) (NVLp); n=2; Endopterygota|Rep: PREDICTED:
           similar to Nuclear valosin-containing protein-like
           (Nuclear VCP-like protein) (NVLp) - Tribolium castaneum
          Length = 822

 Score =  115 bits (277), Expect = 1e-24
 Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 8/233 (3%)
 Frame = +1

Query: 139 RQKTLNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYK 318
           R   ++DP +V RV+ YL  NVDKTFVD++ MA  L+  YREY      AF   V+ AY 
Sbjct: 3   RMPYMSDPTLVPRVQKYLESNVDKTFVDINVMADDLQRSYREYARLKRNAFRAQVKKAYS 62

Query: 319 VVLQSYGLD----GASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPT 486
           +VLQSYGL+     +S                + ++LN +++ +Y      +        
Sbjct: 63  IVLQSYGLEDQDNSSSEDEDDSEDSAPEASTFHNNSLNNQLVNLYNRPQVPKQIDENELI 122

Query: 487 DKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRK 666
           D + +  +  + ++  S  P   +   Q    P     TNS  ++ A K + Q   +KRK
Sbjct: 123 DISSDDSEAPAYNDKPSNGPSTSQKESQ--ALPTYQNNTNSKKVD-ANKDRYQYFGRKRK 179

Query: 667 LD----SNKSGAPKKKHETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
            +    +     PKKK    + +   + F+DIGG+  I+  +C L++H++HPE
Sbjct: 180 AETVGLTPYQSTPKKKKSLATLQEPSVSFKDIGGMDKILEDVCKLLIHVRHPE 232


>UniRef50_Q7Q5U3 Cluster: ENSANGP00000020514; n=2; Culicidae|Rep:
           ENSANGP00000020514 - Anopheles gambiae str. PEST
          Length = 956

 Score = 79.8 bits (188), Expect = 8e-14
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
 Frame = +1

Query: 187 YLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQSYGLDGASTXXX 366
           YL ENV +T+VD   MAR L++RYREYN R    F  +VE AY+ VL SYGLD   +   
Sbjct: 20  YLEENVHQTYVDTGVMARELQQRYREYNRRKANPFRLLVEEAYRTVLHSYGLDSNPSSEV 79

Query: 367 XXXXXXXXXXXXNTSALNE---RILAMYKMQDKKRPAASRRPTDKAGEPIDILSSDEDG 534
                        ++  N+    + +MY     + P   +  +  AG+ IDI S +E+G
Sbjct: 80  EEEAGSDVEVMDESAQRNQMSNTLTSMYMNNRARPPVPDQSGSGAAGDAIDISSDEEEG 138



 Score = 42.3 bits (95), Expect = 0.014
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +1

Query: 721 KMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
           +MV I F+D+GG+  I+  +C+L+LH+ HPE
Sbjct: 251 RMVDITFDDVGGMDHILKNLCELLLHVIHPE 281


>UniRef50_Q9VS62 Cluster: CG8571-PA, isoform A; n=5; Sophophora|Rep:
           CG8571-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 944

 Score = 74.9 bits (176), Expect = 2e-12
 Identities = 55/195 (28%), Positives = 91/195 (46%)
 Frame = +1

Query: 151 LNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQ 330
           L+D +I  RVK YL E++ +T++DV QM R L ++Y EY+ R    F Q+V  A+ ++ +
Sbjct: 8   LHDHLITIRVKKYLEEHIGETYLDVKQMTRELMQKYPEYSRRKFGPFRQLVHQAFSIISE 67

Query: 331 SYGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPTDKAGEPID 510
           SY LD  S+               N S +N  + ++Y     ++P A +       EPID
Sbjct: 68  SYNLDKVSSSEEDCVSEDSEPPPTN-SVMNNMMNSLY--SQPRKPLAPK----PISEPID 120

Query: 511 ILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRKLDSNKSGA 690
           I S DE+   +       D +      P  T +    SALK+  + +  +  + + K   
Sbjct: 121 ISSGDENEDDSNTKTTNGDGVAAAAAPPPPTPAVQ-GSALKRLMEEV-PEIAVAAKKVAK 178

Query: 691 PKKKHETGSAKMVKI 735
           P   H + S  + K+
Sbjct: 179 PNTIHVSSSEAIQKL 193



 Score = 33.5 bits (73), Expect = 6.5
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 739 FEDIGGLSDIITXICDLILHMKHPE 813
           F DIGG+   +  +C++++H+K PE
Sbjct: 250 FRDIGGMDSTLKELCEMLIHIKSPE 274


>UniRef50_Q803I9 Cluster: Nuclear VCP-like; n=4; Deuterostomia|Rep:
           Nuclear VCP-like - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 796

 Score = 62.9 bits (146), Expect = 9e-09
 Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 27/246 (10%)
 Frame = +1

Query: 157 DPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYR-EYNNRSDTAFCQMVEAAYKVV--- 324
           DP +  RV  YL    D+ +VDVS MA  L++++R EY  R+ TAF   VE  + ++   
Sbjct: 10  DPRLKHRVHQYLKTRNDQ-YVDVSAMASELQQQFRIEYGRRNRTAFRIQVEKVFALICSE 68

Query: 325 -------LQSYGL-----------DGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQ 450
                  L++  L           DG+                 +T+ +N  + ++Y+  
Sbjct: 69  SDSEFSALENKHLAKRARRSPEDGDGSHVTASSTDSEDDIPEHEHTNHMNSSLTSLYQRG 128

Query: 451 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESAL 630
                ++S      + + I I  + + G  +  +    ++ + T +   + +S+ +E   
Sbjct: 129 AANASSSSTIQRSLSDDWI-IDKTGDRGQESILIDLCEEESSSTTN---QRDSSRLEKEK 184

Query: 631 KQQNQPLDKKRKLDSNK---SGAPKKKHETGSAKMV--KIGFEDIGGLSDIITXICDLIL 795
           K   Q   KK KL+ +    +G P KK +    ++    + FED GG  + +  +C L++
Sbjct: 185 KSVKQKRQKKNKLEEDSETSAGVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLI 244

Query: 796 HMKHPE 813
           HM+HPE
Sbjct: 245 HMRHPE 250


>UniRef50_Q4TBC8 Cluster: Chromosome undetermined SCAF7151, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7151,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 795

 Score = 41.1 bits (92), Expect = 0.032
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +1

Query: 700 KHETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
           K ++   +   + FED+GG  + +T +C L++HM+HPE
Sbjct: 117 KSKSAELQYPSLKFEDVGGNEETLTELCKLLIHMRHPE 154


>UniRef50_Q9U8K0 Cluster: Cell survival CED-4-interacting protein
           MAC-1; n=3; Caenorhabditis|Rep: Cell survival
           CED-4-interacting protein MAC-1 - Caenorhabditis elegans
          Length = 813

 Score = 41.1 bits (92), Expect = 0.032
 Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 10/230 (4%)
 Frame = +1

Query: 154 NDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQS 333
           +DP ++ RV+ ++ +     +     +A  L++ + EY  ++   F  MV  A + + Q 
Sbjct: 9   SDPALLPRVQAHIRKFPGTKYFKPELVAYDLQQEHPEYQRKNHKVFMGMVREALERI-QL 67

Query: 334 YGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPTDKAGEPIDI 513
              +                      AL  R         +K PAA R+ T +A    ++
Sbjct: 68  VAKEENDEKMEEKEAMDDVQEIPIVKALETR--------KRKAPAAGRKSTGQAAAAKEV 119

Query: 514 LSSD--EDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQ-NQPLDKKRKLDSNKS 684
           + SD  ED  AA +L K  + +          N    +SA     + P ++  K     S
Sbjct: 120 VLSDDSEDERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGAS 179

Query: 685 GAPKKK-------HETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
            AP           +T S +   + FE IGG       +C L +H+K P+
Sbjct: 180 AAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCRLAMHLKRPK 229


>UniRef50_UPI00005A22AF Cluster: PREDICTED: hypothetical protein
           XP_863658; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_863658 - Canis familiaris
          Length = 282

 Score = 38.7 bits (86), Expect = 0.17
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 514 LSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQ-NQPLDKKRKLDSNKSGA 690
           LS  E+ S   ++PK N+ +T   H+   + +   E A+  +  QPL KK+K    K   
Sbjct: 98  LSRPEESSTCLRIPKSNENLTPPTHLEIISITPVSERAMTDELVQPLHKKKKKKKKKKKK 157

Query: 691 PKKKHE 708
            KKK E
Sbjct: 158 KKKKEE 163


>UniRef50_A7ESG8 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 993

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +1

Query: 448 QDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIP 594
           +D+KRP +S RP D   +  D++   ED S  P +P  + +I + P IP
Sbjct: 361 EDEKRPVSSSRPADVVPDVEDVVPEKEDESVPPPVP--SHEIGVPPPIP 407


>UniRef50_O15381 Cluster: Nuclear valosin-containing protein-like;
           n=29; Eumetazoa|Rep: Nuclear valosin-containing
           protein-like - Homo sapiens (Human)
          Length = 856

 Score = 36.7 bits (81), Expect = 0.70
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
 Frame = +1

Query: 556 KINDQITITPHIPARTNSTAIESALKQQNQPLDK--KRK------LDSNKSGAPKKKHET 711
           K N +  IT  I    +S+ +ES +K++ +  +K  KRK      +D       +KK + 
Sbjct: 194 KSNPKKPIT-EIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKA 252

Query: 712 GSAK--MVKIGFEDIGGLSDIITXICDLILHMKHPE 813
              +  +  + FED+GG    +  +C +++HM+HPE
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPE 288


>UniRef50_Q3MPK0 Cluster: Putative uncharacterized protein
           CaJ7.0155; n=2; Candida albicans|Rep: Putative
           uncharacterized protein CaJ7.0155 - Candida albicans
           (Yeast)
          Length = 772

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = +1

Query: 511 ILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIE-SALKQQNQPLDKKRKLDSNKSG 687
           IL++ +D  A   LPK +    IT +   + N   ++    KQQ Q   ++++   NK G
Sbjct: 151 ILNNQQDWLAF--LPKKSMIQIITYYELLKNNYKTLQRQQQKQQQQQRQRQKRYRKNKKG 208

Query: 688 APKKKHETGSAKMVKIGFEDI 750
             KK+HE G  +   + + DI
Sbjct: 209 KSKKRHEDGDGESSLLSYRDI 229


>UniRef50_UPI0000584228 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 179

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = +1

Query: 487 DKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRK 666
           D++ + I I +SD D S  PK  K   +    P    +   T++ +ALK+ N P  KK  
Sbjct: 13  DESSDQISI-NSDSDASPVPKT-KAKAKPAPKPKAARKETKTSMSNALKKMNAPKRKKES 70

Query: 667 -LDSN---KSGAPKKKHETGSAKMVKIGFEDIGGLS 762
             DS+   K  A KK     S+K +    +D  G+S
Sbjct: 71  DSDSDFGVKKHAAKKPSAKPSSKYIDSDSDDDFGIS 106


>UniRef50_UPI0000660479 Cluster: Nuclear valosin-containing
           protein-like (Nuclear VCP-like protein) (NVLp).; n=1;
           Takifugu rubripes|Rep: Nuclear valosin-containing
           protein-like (Nuclear VCP-like protein) (NVLp). -
           Takifugu rubripes
          Length = 488

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 700 KHETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
           K ++   ++  + FED+GG    +  +C L++HM HPE
Sbjct: 2   KSKSPELQVPSLKFEDVGGNEATLMELCKLLIHMHHPE 39


>UniRef50_Q18TV8 Cluster: ATPase; n=3; Bacteria|Rep: ATPase -
           Desulfitobacterium hafniense (strain DCB-2)
          Length = 399

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +1

Query: 136 TRQKTLNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAY 315
           T++  + +  + SRV NY+ ENV KTF   + + + LK   R  +  +   + Q +E A+
Sbjct: 202 TKRHNITNFDLFSRVVNYILENVGKTF-SANAIVKFLKSEGRALSVETVYNYLQWLEKAF 260

Query: 316 KVV-LQSYGLDGAS 354
            +   Q Y L G S
Sbjct: 261 VIYRCQRYDLQGKS 274


>UniRef50_Q17EV9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1344

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
 Frame = +1

Query: 421 ERILAMYKMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPAR 600
           E++L      D    A   +PT+K  E   + SSDE  S     P +  ++  TP +PA 
Sbjct: 521 EQVLPSSTEVDSAVSAVPEQPTEKPSEVETVTSSDEKPS---NEPTVIQEVDSTPEVPAT 577

Query: 601 TNSTAIESALKQQNQPLDKKRKL-DSNKSGAPK 696
              T+ E A +++   +D +  + +S+K  AP+
Sbjct: 578 AAETS-EPAKEEEPMEVDSEPVVEESSKVDAPE 609


>UniRef50_Q7KY09 Cluster: Trio; n=10; Diptera|Rep: Trio - Drosophila
            melanogaster (Fruit fly)
          Length = 2263

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 24/124 (19%), Positives = 53/124 (42%)
 Frame = +1

Query: 109  LLEMKKTHNTRQKTLNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTA 288
            L E  +  +T ++T     ++ ++ + L E       D+ Q   S+ +RY++++NR D +
Sbjct: 1162 LKEHNEFRSTAKETRERVKLLIQLADSLVEKGHAHASDIKQWVASVDQRYKDFSNRMD-S 1220

Query: 289  FCQMVEAAYKVVLQSYGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPA 468
            +C+ +E +  +  Q   L                      + LN       ++ ++KR +
Sbjct: 1221 YCEQLEKSLGMSQQQLLLGSDGNSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKS 1280

Query: 469  ASRR 480
            A R+
Sbjct: 1281 ARRK 1284


>UniRef50_Q03BV4 Cluster: Uncharacterized conserved membrane
            associated protein; n=1; Lactobacillus casei ATCC
            334|Rep: Uncharacterized conserved membrane associated
            protein - Lactobacillus casei (strain ATCC 334)
          Length = 1488

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
 Frame = +1

Query: 445  MQDKKRPAASRRPTDKAGEPI---DILSSDEDGSAAPKLPKINDQIT---------ITPH 588
            +Q K  PAAS +  DKA E     D ++  E   +A   P I D  T         I P 
Sbjct: 792  IQPKSDPAASLQSNDKAVEAAIENDKIAEKEGHQSANTQPAITDVTTDKNSAVKSEIDPT 851

Query: 589  IPARTNSTAIESALKQQNQPLDKKRKLDSNKSG-APKKKHETG 714
              +++N  A+E+A++      DK  K DS ++  AP     +G
Sbjct: 852  ASSQSNDKAVEAAMEDSKAENDKGSKSDSAETNIAPTMAKNSG 894


>UniRef50_Q93SC5 Cluster: RepF protein; n=2; Frankia|Rep: RepF
           protein - Frankia sp. ArI3
          Length = 202

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 484 TDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKKR 663
           TDK  +P   L     G+    +P + +  T+ P    R +   +E+A++QQ   LD+ R
Sbjct: 46  TDKIKQPGGWLMYRLTGTRKTGVPALPEGPTVCPCTACRRHVRQVEAAIRQQTAELDRAR 105

Query: 664 KLDSNKSGAP-KKKHET 711
           +  + ++  P + ++ET
Sbjct: 106 QRHAEQTDDPGRARYET 122


>UniRef50_Q5BYA5 Cluster: SJCHGC04689 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04689 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 426

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +1

Query: 499 EPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRKLDSN 678
           E + + S D D     K  ++    T  PHI   + +  IE      NQ L +KR   S 
Sbjct: 4   EELPVASKDNDEGIRKKRKRLTGPQT--PHIHTESPTVNIEPTTPATNQTLTRKRTAASP 61

Query: 679 KSGAPKKK 702
           K   PKKK
Sbjct: 62  KLQEPKKK 69


>UniRef50_Q54MH9 Cluster: Replication factor C subunit; n=1;
           Dictyostelium discoideum AX4|Rep: Replication factor C
           subunit - Dictyostelium discoideum AX4
          Length = 1401

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 24/89 (26%), Positives = 47/89 (52%)
 Frame = +1

Query: 451 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESAL 630
           DKK+P+ ++ P  K       L+SDED S++ +  K     + +   P+ ++S+++ +  
Sbjct: 94  DKKKPSENKSPKKKEPSKSIDLTSDEDKSSSEE-DKKKPSSSSSKKKPS-SSSSSLPNKK 151

Query: 631 KQQNQPLDKKRKLDSNKSGAPKKKHETGS 717
           K   + L KKR   S+ S + +   ++GS
Sbjct: 152 KSTLKRLKKKRDDSSSSSSSSESDFDSGS 180


>UniRef50_A2ECB6 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 3352

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 21/97 (21%), Positives = 41/97 (42%)
 Frame = +1

Query: 442  KMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIE 621
            K Q++       +P DK+        SD   + APK    +D   ++  +     +T   
Sbjct: 1529 KPQNEPHSQTQEKPQDKSQNDSSAKPSDSYQNQAPKQENADDSKPLSAVLSGVIAATQSP 1588

Query: 622  SALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVK 732
            S  +  NQP  + + +++N+   P+ K  + S +  K
Sbjct: 1589 SQTQTLNQPQSESKPINNNQQQNPENKDISSSPQQNK 1625


>UniRef50_Q8TL16 Cluster: Predicted protein; n=1; Methanosarcina
           acetivorans|Rep: Predicted protein - Methanosarcina
           acetivorans
          Length = 285

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +1

Query: 523 DEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRKLDSNKSGAPKKK 702
           +ED + A + P+IN+ I+              E+A+ + N  +D  + + +N  G  KK 
Sbjct: 104 NEDNTRAVR-PEINELISYMKSEMGLKTKREFENAILRANYLIDLLKNV-TNDGGYWKKN 161

Query: 703 HETGSAKMVKIGFED 747
            +TG  + +KI F+D
Sbjct: 162 EKTGENEFIKISFDD 176


>UniRef50_A7FXA0 Cluster: Putative uncharacterized protein; n=2;
           Clostridium botulinum A|Rep: Putative uncharacterized
           protein - Clostridium botulinum (strain ATCC 19397 /
           Type A)
          Length = 527

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +1

Query: 73  NLTFLQTILRRNLLEMKKTHNTRQKTLNDPVIVSRVKNYLAENVDKTFVDVSQMARSLKE 252
           NL +++T +   L  +K+T   R+K  N+   +   K++ A+N DK +  +S +  + + 
Sbjct: 282 NLNYIRTAIDEELQHIKRTLIKRKKYSNEDADIEIEKSF-AKNADKLYEYLSSIFNNKEN 340

Query: 253 RYREYN 270
           RY+  N
Sbjct: 341 RYKLLN 346


>UniRef50_Q9M261 Cluster: Putative uncharacterized protein F7M19_10;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F7M19_10 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 569

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +1

Query: 451 DKKRPAASRRPTDKAGEPIDILSSDE--DGSAAPKLPKINDQITITPHIPARTNSTAIES 624
           +KKR A  RR  +++G P +   + E     AAP  P + DQ+   P  P  T + A+  
Sbjct: 300 EKKRAAEERRVVEESG-PAEPSGAREVVPEVAAPAAPDVVDQVPADP--PIETATQAV-I 355

Query: 625 ALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVKIGFEDIGGLSDII 771
           AL  +++   K  ++D+++    KKK +  + +     FED    ++++
Sbjct: 356 ALPARDKASGKSPQIDTSQEKRRKKKKKKLAKEDKPPIFEDRAASANLV 404


>UniRef50_A3BFF1 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 139

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -2

Query: 587 CGVIVIWSLILGNLGAALPSSSLLKMSIGSP-ALSVGRRLAA 465
           CG  V W  IL N G A PS++   +S G   A+SVGRRL A
Sbjct: 31  CGYTV-WPGILSNAGVAPPSTTGFALSPGQTLAVSVGRRLGA 71


>UniRef50_UPI000155612C Cluster: PREDICTED: similar to Janus kinase
           1 (a protein tyrosine kinase), partial; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           Janus kinase 1 (a protein tyrosine kinase), partial -
           Ornithorhynchus anatinus
          Length = 686

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 406 TSALNERILAMYKMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAP 546
           T AL+ER+L + + +D+  P   RRPT+  G P         G   P
Sbjct: 258 TMALSERLLPVDRARDEATPRCRRRPTEGPGPPSRRCGRSPSGKTRP 304


>UniRef50_Q6EEU4 Cluster: Syntaxin 5-like protein; n=3; Entamoeba
           histolytica|Rep: Syntaxin 5-like protein - Entamoeba
           histolytica
          Length = 292

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +1

Query: 115 EMKKTHNTRQKTLNDPVIVSRVKNYLAENVDKTFVDVSQM-ARSLKERYREYNNRS 279
           E++K +    +  N   IV +  NYL +N  K+F DV Q+ A S+KE+ ++ +  S
Sbjct: 108 EIEKKYGITGQNENHREIVCKHLNYLVKNTTKSFTDVLQIRAESIKEQEKKKHKYS 163


>UniRef50_A0DD16 Cluster: Chromosome undetermined scaffold_46, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_46, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1572

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -3

Query: 184  FLHVTLLRDHSKFFALYCEFSSFPRDFVSVLFVKRLNFHNGQN 56
            + +V++L+   KFF L+C FS   +DFV   F++  +F+N  N
Sbjct: 1211 YFYVSILKMKIKFFKLFCTFS---KDFVKEQFIQYHSFYNQIN 1250


>UniRef50_Q968X7 Cluster: Pyruvate dehydrogenase [NADP+]; n=5;
            Cryptosporidium|Rep: Pyruvate dehydrogenase [NADP+] -
            Cryptosporidium parvum
          Length = 1934

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
 Frame = +2

Query: 428  YWPCTKCKIKNVRLRVGAPPTRQASLSTS*AAMKTAVRLPNYLKLTTK*LSHHISQPELT 607
            YWP  +   + VR  V    T   S   +  + K  V + N+LK   + L    S PEL 
Sbjct: 1160 YWPLYRYNPELVRTEVVDNLTTIVSSGFTLDSKKVKVDIENFLKRENRFLQLIRSNPELA 1219

Query: 608  AR---RLRVHSN---NKTNHLIKNVSLTAIK 682
            +    +L+ HS+    K   + +NV++TA+K
Sbjct: 1220 SMAKDKLKAHSDKRFQKMKDMSENVTVTALK 1250


>UniRef50_Q4UA33 Cluster: Putative uncharacterized protein; n=3;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 2865

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 584 HISQPELTARRLRVHSNNKTNHLIKNVSLTAIKVEHRRKNMRLDQ 718
           HI +PE   R +RVH  NK N +  NV L + +  H     R DQ
Sbjct: 821 HILRPEEHIRSVRVHPKNKKNKINFNVDLKSDEHGHFPAGTRADQ 865


>UniRef50_A2DGJ0 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1633

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = +1

Query: 508  DILSSDEDGSAAPKLPKINDQITI---TPHIPARTNSTAIES-ALKQQNQPLDKKRKLDS 675
            D+L  D D  AA ++P+ N  IT+   T  I A T++ A +S ALK  N+ L K  ++ S
Sbjct: 1216 DVLIIDPDPVAASRVPEFNTNITVPTLTSEI-APTDALADQSAALKAYNEALQKFNQVYS 1274

Query: 676  NKSGAPKK 699
            N+    ++
Sbjct: 1275 NEQATSEE 1282


>UniRef50_A0CBW4 Cluster: Chromosome undetermined scaffold_165, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_165, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 3045

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 620  RVHSNNKTNHLIKNVSLTAIKVEHRRKNM 706
            R+H+ N+  HLI+N+S TA  +  RR N+
Sbjct: 2341 RIHAQNRKMHLIQNLSSTACTINSRRYNI 2369


>UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:
           NEQ475 - Nanoarchaeum equitans
          Length = 826

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +1

Query: 712 GSAKMVKIGFEDIGGLSDIITXICDLI-LHMKHPE 813
           G  ++ ++ +EDIGG+ D+I  + +L+ L ++HPE
Sbjct: 181 GVQEIPEVTYEDIGGMKDVIQKVRELVELPLRHPE 215


>UniRef50_Q06SI4 Cluster: Chloroplast 30S ribosomal protein S3; n=78;
            Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 -
            Stigeoclonium helveticum (Green alga)
          Length = 1126

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +1

Query: 58   FAR-CGNLTFLQTILRRNLLEMKKTHNTRQKTLNDPVIVSRVKNYLAENVDKTFVDVSQM 234
            FA+ C NLT LQT+ + +++E+ K H  +Q  +        + N++ EN++K F   S M
Sbjct: 995  FAKLCENLTNLQTMPKVSVIELVKVHQPKQYAV-------CLANFVVENLEKRFSFRSTM 1047

Query: 235  ARSLKE 252
             R+ ++
Sbjct: 1048 KRASEQ 1053


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,803,144
Number of Sequences: 1657284
Number of extensions: 15024719
Number of successful extensions: 51951
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 49373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51886
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

- SilkBase 1999-2023 -