Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I21
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -3

Query: 463 DVFYLAFCTWPIYVRLTHWCFRLTILNLTLPPTHLMWTLRRGRNSV 326
           ++FYL FC + + V +  +       N T    H +W     +N V
Sbjct: 320 NLFYLCFCFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYALKNEV 365


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -3

Query: 463 DVFYLAFCTWPIYVRLTHWCFRLTILNLTLPPTHLMWTLRRGRNSV 326
           ++FYL FC + + V +  +       N T    H +W     +N V
Sbjct: 276 NLFYLCFCFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYALKNEV 321


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 578  SHHISQPELTARRLRVHSNNKTNHLIKNVSLTA 676
            SH ++  +    +   H+NN+T+    N S+ A
Sbjct: 988  SHPLAALQKLCDKTETHTNNRTHSATSNSSVNA 1020


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 237 RHLTDIDKRFVHIFGQIIFY 178
           RH  +  + ++H F Q++ Y
Sbjct: 149 RHTVEYFQNYIHFFYQLLLY 168


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 490 KAGEPIDILSSDEDGSAAPKL 552
           K   PID++  + DG   P+L
Sbjct: 24  KGKMPIDLVIDERDGGKPPEL 44


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 490 KAGEPIDILSSDEDGSAAPKL 552
           K   PID++  + DG   P+L
Sbjct: 180 KGKMPIDLVIDERDGGKPPEL 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,101
Number of Sequences: 336
Number of extensions: 3946
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)