Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_I21
(813 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 37 0.100
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 37 0.100
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 36 0.17
D79986-1|BAA11481.2| 929|Homo sapiens KIAA0164 protein. 31 3.7
BC132780-1|AAI32781.1| 920|Homo sapiens BCL2-associated transcr... 31 3.7
BC063846-1|AAH63846.1| 705|Homo sapiens BCLAF1 protein protein. 31 3.7
AL121713-4|CAB96722.1| 920|Homo sapiens protein ( Human DNA seq... 31 3.7
AF249273-1|AAF64304.1| 869|Homo sapiens Bcl-2-associated transc... 31 3.7
BC047887-1|AAH47887.1| 689|Homo sapiens BCLAF1 protein protein. 31 6.5
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 31 6.5
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 31 6.5
U83857-1|AAB86528.1| 528|Homo sapiens Aac11 protein. 30 8.7
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 30 8.7
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 36.7 bits (81), Expect = 0.100
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Frame = +1
Query: 556 KINDQITITPHIPARTNSTAIESALKQQNQPLDK--KRK------LDSNKSGAPKKKHET 711
K N + IT I +S+ +ES +K++ + +K KRK +D +KK +
Sbjct: 88 KSNPKKPIT-EIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKA 146
Query: 712 GSAK--MVKIGFEDIGGLSDIITXICDLILHMKHPE 813
+ + + FED+GG + +C +++HM+HPE
Sbjct: 147 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPE 182
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 36.7 bits (81), Expect = 0.100
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Frame = +1
Query: 556 KINDQITITPHIPARTNSTAIESALKQQNQPLDK--KRK------LDSNKSGAPKKKHET 711
K N + IT I +S+ +ES +K++ + +K KRK +D +KK +
Sbjct: 194 KSNPKKPIT-EIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKA 252
Query: 712 GSAK--MVKIGFEDIGGLSDIITXICDLILHMKHPE 813
+ + + FED+GG + +C +++HM+HPE
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPE 288
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 35.9 bits (79), Expect = 0.17
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Frame = +1
Query: 604 NSTAIESALKQQNQPLDK--KRK------LDSNKSGAPKKKHETGSAK--MVKIGFEDIG 753
+S+ +ES +K++ + +K KRK +D +KK + + + + FED+G
Sbjct: 12 DSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVG 71
Query: 754 GLSDIITXICDLILHMKHPE 813
G + +C +++HM+HPE
Sbjct: 72 GNDMTLKEVCKMLIHMRHPE 91
>D79986-1|BAA11481.2| 929|Homo sapiens KIAA0164 protein.
Length = 929
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 EDGSAAPKLPKINDQITITPH-IPARTNSTAIESALKQQNQPLDKKRKLDS 675
E+ S K P+I+ +I I+P + T E K++NQ DKK + DS
Sbjct: 649 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDS 699
>BC132780-1|AAI32781.1| 920|Homo sapiens BCL2-associated
transcription factor 1 protein.
Length = 920
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 EDGSAAPKLPKINDQITITPH-IPARTNSTAIESALKQQNQPLDKKRKLDS 675
E+ S K P+I+ +I I+P + T E K++NQ DKK + DS
Sbjct: 640 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDS 690
>BC063846-1|AAH63846.1| 705|Homo sapiens BCLAF1 protein protein.
Length = 705
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 EDGSAAPKLPKINDQITITPH-IPARTNSTAIESALKQQNQPLDKKRKLDS 675
E+ S K P+I+ +I I+P + T E K++NQ DKK + DS
Sbjct: 640 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDS 690
>AL121713-4|CAB96722.1| 920|Homo sapiens protein ( Human DNA
sequence from clone CTA-211L9 on chromosome 6 Contains
thegene for KIAA0164 protein, the 5' end of a novel gene
and two CpG ).
Length = 920
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 EDGSAAPKLPKINDQITITPH-IPARTNSTAIESALKQQNQPLDKKRKLDS 675
E+ S K P+I+ +I I+P + T E K++NQ DKK + DS
Sbjct: 640 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDS 690
>AF249273-1|AAF64304.1| 869|Homo sapiens Bcl-2-associated
transcription factor short form protein.
Length = 869
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 EDGSAAPKLPKINDQITITPH-IPARTNSTAIESALKQQNQPLDKKRKLDS 675
E+ S K P+I+ +I I+P + T E K++NQ DKK + DS
Sbjct: 638 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKLRCDS 688
>BC047887-1|AAH47887.1| 689|Homo sapiens BCLAF1 protein protein.
Length = 689
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 526 EDGSAAPKLPKINDQITITPH-IPARTNSTAIESALKQQNQPLDKKRK 666
E+ S K P+I+ +I I+P + T E K++NQ DKK+K
Sbjct: 640 EEHSTRQKSPEIHRRIDISPSTLRKHTRLAGEERVFKEENQKGDKKKK 687
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 30.7 bits (66), Expect = 6.5
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 16/141 (11%)
Frame = +1
Query: 349 ASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPT------DKAGEPID 510
+S+ SA N + K++D K+ ++PT D+AG +D
Sbjct: 168 SSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLD 227
Query: 511 -----ILSSDEDGSAAPKL---PKINDQITITPH--IPARTNSTAIESALKQQNQPLDKK 660
+ + D + K+ PKI I P +P ++++ S + ++ K
Sbjct: 228 NGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETK 287
Query: 661 RKLDSNKSGAPKKKHETGSAK 723
+NK + K +T SAK
Sbjct: 288 ETTTTNKQTSTDGKEKTTSAK 308
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 30.7 bits (66), Expect = 6.5
Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 16/141 (11%)
Frame = +1
Query: 349 ASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPT------DKAGEPID 510
+S+ SA N + K++D K+ ++PT D+AG +D
Sbjct: 127 SSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLD 186
Query: 511 -----ILSSDEDGSAAPKL---PKINDQITITPH--IPARTNSTAIESALKQQNQPLDKK 660
+ + D + K+ PKI I P +P ++++ S + ++ K
Sbjct: 187 NGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETK 246
Query: 661 RKLDSNKSGAPKKKHETGSAK 723
+NK + K +T SAK
Sbjct: 247 ETTTTNKQTSTDGKEKTTSAK 267
>U83857-1|AAB86528.1| 528|Homo sapiens Aac11 protein.
Length = 528
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 586 HIPARTNSTAIESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKM 726
HIP ST S Q + +KR + SG+P KK G +M
Sbjct: 436 HIPPSYKSTVTLSWKPVQKVEIGQKRASEDTTSGSPPKKSSAGPKRM 482
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 30.3 bits (65), Expect = 8.7
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Frame = +1
Query: 409 SALNERILAMYKMQDKKRPAASRRPT------DKAGEPID-----ILSSDEDGSAAPKL- 552
SA N + K++D K+ ++PT D+AG +D + + D + K+
Sbjct: 188 SAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVS 247
Query: 553 --PKINDQITITPH--IPARTNSTAIESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSA 720
PKI I P +P ++++ S + ++ K +NK + K +T SA
Sbjct: 248 TSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSA 307
Query: 721 K 723
K
Sbjct: 308 K 308
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,651,670
Number of Sequences: 237096
Number of extensions: 2251162
Number of successful extensions: 9982
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9971
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -