Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_I21
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 41 0.001
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 41 0.001
U41104-3|AAK18975.1| 378|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z32683-7|CAA83618.1| 113|Caenorhabditis elegans Hypothetical pr... 32 0.56
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 32 0.56
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 0.56
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 0.56
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 31 0.98
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 31 0.98
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 30 2.3
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 30 2.3
AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical... 29 3.0
AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical... 29 3.0
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical pr... 29 4.0
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 29 4.0
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 29 5.2
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical ... 28 6.9
Z68752-11|CAM82780.1| 324|Caenorhabditis elegans Hypothetical p... 28 9.1
Z68752-10|CAA92986.1| 354|Caenorhabditis elegans Hypothetical p... 28 9.1
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 28 9.1
AL023840-2|CAM82781.1| 324|Caenorhabditis elegans Hypothetical ... 28 9.1
AL023840-1|CAA19510.1| 354|Caenorhabditis elegans Hypothetical ... 28 9.1
AF016438-12|AAK84532.1| 407|Caenorhabditis elegans Nuclear horm... 28 9.1
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 28 9.1
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 28 9.1
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 41.1 bits (92), Expect = 0.001
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 10/230 (4%)
Frame = +1
Query: 154 NDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQS 333
+DP ++ RV+ ++ + + +A L++ + EY ++ F MV A + + Q
Sbjct: 9 SDPALLPRVQAHIRKFPGTKYFKPELVAYDLQQEHPEYQRKNHKVFMGMVREALERI-QL 67
Query: 334 YGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPTDKAGEPIDI 513
+ AL R +K PAA R+ T +A ++
Sbjct: 68 VAKEENDEKMEEKEAMDDVQEIPIVKALETR--------KRKAPAAGRKSTGQAAAAKEV 119
Query: 514 LSSD--EDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQ-NQPLDKKRKLDSNKS 684
+ SD ED AA +L K + + N +SA + P ++ K S
Sbjct: 120 VLSDDSEDERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGAS 179
Query: 685 GAPKKK-------HETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
AP +T S + + FE IGG +C L +H+K P+
Sbjct: 180 AAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCRLAMHLKRPK 229
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 41.1 bits (92), Expect = 0.001
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 10/230 (4%)
Frame = +1
Query: 154 NDPVIVSRVKNYLAENVDKTFVDVSQMARSLKERYREYNNRSDTAFCQMVEAAYKVVLQS 333
+DP ++ RV+ ++ + + +A L++ + EY ++ F MV A + + Q
Sbjct: 9 SDPALLPRVQAHIRKFPGTKYFKPELVAYDLQQEHPEYQRKNHKVFMGMVREALERI-QL 67
Query: 334 YGLDGASTXXXXXXXXXXXXXXXNTSALNERILAMYKMQDKKRPAASRRPTDKAGEPIDI 513
+ AL R +K PAA R+ T +A ++
Sbjct: 68 VAKEENDEKMEEKEAMDDVQEIPIVKALETR--------KRKAPAAGRKSTGQAAAAKEV 119
Query: 514 LSSD--EDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQ-NQPLDKKRKLDSNKS 684
+ SD ED AA +L K + + N +SA + P ++ K S
Sbjct: 120 VLSDDSEDERAARQLEKQIESLKTNRANKTVLNLYTKKSAPSTPVSTPKNQATKKPPGAS 179
Query: 685 GAPKKK-------HETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHPE 813
AP +T S + + FE IGG +C L +H+K P+
Sbjct: 180 AAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCRLAMHLKRPK 229
>U41104-3|AAK18975.1| 378|Caenorhabditis elegans Hypothetical
protein T12C9.1 protein.
Length = 378
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 130 EFSSFPRDFVSVLFVKRLNFHNGQNAMFSFDSGVSNRLNHRP 5
EFS+ P D KR+ FHN A F +SG S+ LN+ P
Sbjct: 183 EFSNLPID------QKRILFHNSYTAFFIMESGFSSHLNNTP 218
>Z32683-7|CAA83618.1| 113|Caenorhabditis elegans Hypothetical
protein R07E5.11 protein.
Length = 113
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 481 PTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALKQQNQPLDKK 660
P D++GE + + P +P+I + I+ + R TAI+ LK P D
Sbjct: 45 PFDRSGEYDEDVDLAAPPPITPDIPEIPADVLIS--LKNRAEGTAID--LKNLKNPFDDS 100
Query: 661 RKLDSNKSGAPKK 699
+K+D ++ AP K
Sbjct: 101 QKVDESEVEAPLK 113
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 595 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVKIGFED 747
A+ N A A+K+Q + LD+K KL++N KS A K K E SA K E+
Sbjct: 9674 AQINKAAEADAVKKQKE-LDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEE 9724
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 595 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVKIGFED 747
A+ N A A+K+Q + LD+K KL++N KS A K K E SA K E+
Sbjct: 9694 AQINKAAEADAVKKQKE-LDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEE 9744
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 595 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVKIGFED 747
A+ A A+K+Q + LD+K KL++N KS A K K E SA K E+
Sbjct: 13327 AQIKKAAGADAVKKQKE-LDEKNKLEANKKSAAGKLKIEEESAAKSKQTVEE 13377
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 595 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVKIGFED 747
A+ N A A+K+Q + LD+K KL++N KS A K K E SA K E+
Sbjct: 9694 AQINKAAEADAVKKQKE-LDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEE 9744
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 595 ARTNSTAIESALKQQNQPLDKKRKLDSN-KSGAPKKKHETGSAKMVKIGFED 747
A+ A A+K+Q + LD+K KL++N KS A K K E SA K E+
Sbjct: 13327 AQIKKAAGADAVKKQKE-LDEKNKLEANKKSAAGKLKIEEESAAKSKQTVEE 13377
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/94 (22%), Positives = 43/94 (45%)
Frame = +1
Query: 442 KMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIE 621
K+++K+ P + + SS+ED + P+ + + + A++ S + E
Sbjct: 38 KLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKS---RKRAKSESESDE 94
Query: 622 SALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAK 723
S ++ + K+K+D K KKK T S++
Sbjct: 95 SDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSE 128
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/94 (22%), Positives = 43/94 (45%)
Frame = +1
Query: 442 KMQDKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIE 621
K+++K+ P + + SS+ED + P+ + + + A++ S + E
Sbjct: 38 KLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKS---RKRAKSESESDE 94
Query: 622 SALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAK 723
S ++ + K+K+D K KKK T S++
Sbjct: 95 SDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSE 128
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -1
Query: 756 TTNILKTYFNHFC*SSLMFFLRCSTFIAVKLT 661
T N+ +TYF+H S+++ F + S FI ++LT
Sbjct: 103 TVNLFRTYFDH---SNVVTFTKLSNFIKIELT 131
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = -1
Query: 756 TTNILKTYFNHFC*SSLMFFLRCSTFIAVKLT 661
T N+ +TYF+H S+++ F + S FI ++LT
Sbjct: 103 TVNLFRTYFDH---SNVVTFTKLSNFIKIELT 131
>AC024817-53|AAP13744.1| 549|Caenorhabditis elegans Hypothetical
protein Y54G2A.26b protein.
Length = 549
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +1
Query: 451 DKKRPAASRRPTDKAGEPIDILSSD----EDGSAAPKLPKINDQITITPHIPARTNSTAI 618
D ++ T++ E I++ +D ED +A+ + N T TP + T++TA+
Sbjct: 435 DHEKKTEDEDETNEETEKIEVQQADQAEREDDAASSE--GTNRSETATPELA--TDTTAV 490
Query: 619 ESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVKIGFED 747
+ + +D +GA KKK + +A IG +D
Sbjct: 491 AKKTRSAAARRKNTKTVDDEFAGATKKKRGSVTAATAGIGGDD 533
>AC024817-52|AAF59568.4| 611|Caenorhabditis elegans Hypothetical
protein Y54G2A.26a protein.
Length = 611
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +1
Query: 451 DKKRPAASRRPTDKAGEPIDILSSD----EDGSAAPKLPKINDQITITPHIPARTNSTAI 618
D ++ T++ E I++ +D ED +A+ + N T TP + T++TA+
Sbjct: 497 DHEKKTEDEDETNEETEKIEVQQADQAEREDDAASSE--GTNRSETATPELA--TDTTAV 552
Query: 619 ESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVKIGFED 747
+ + +D +GA KKK + +A IG +D
Sbjct: 553 AKKTRSAAARRKNTKTVDDEFAGATKKKRGSVTAATAGIGGDD 595
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 771 NDVRKTTNILKTYFNHF-C*SSLMFFLRCSTFIAVKLTFFIKWLVLLFECTLNRRAVSSG 595
N + NI +N F C + FLR STF+ + + FF+ + +N VS G
Sbjct: 117 NIISSDGNIWSVEYNKFVCTNGTRMFLRNSTFVCIGVRFFVDKTCAAHDYAVN-FCVSEG 175
Query: 594 WD 589
++
Sbjct: 176 FE 177
>Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical
protein F01G10.9 protein.
Length = 445
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +1
Query: 454 KKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKINDQITITPHIPARTNSTAIESALK 633
KK A+ P D P++++ S + S ++ Q + T + +NS AIE
Sbjct: 142 KKESHATESPEDSLKVPVEVIESRKPLSPPSSSANVSKQRSYTTSSSSSSNS-AIERYNN 200
Query: 634 QQNQPLDKKRKLDSNKSGAPKKKHETGSAK 723
QQN K N+ P + GS K
Sbjct: 201 QQN-----KIGNQDNEEDYPNSMYHRGSRK 225
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 553 PKINDQITITPHIPARTNSTAIESALKQQNQPLDKKRKLDSNKSGAPKKKHETGSAKMVK 732
P N ++++ P + E K +P+DKK K+DS K+G T S K+VK
Sbjct: 1158 PVPNKKVSVGAEKPKKKEKVVDEKD-KADGEPVDKKIKVDSKKNGT------TSSEKVVK 1210
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 685 GAPKKKHETGSAKMVKIGFEDIGGLSDIITXICDLI-LHMKHPE 813
G P K+ E A + ++G++D+GG+ + I +++ L ++HP+
Sbjct: 191 GDPIKREEEEEA-LNEVGYDDLGGVRKQLAQIKEMVELPLRHPQ 233
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 685 GAPKKKHETGSAKMVKIGFEDIGGLSDIITXICDLI-LHMKHPE 813
G P K+ E A + ++G++D+GG+ + I +++ L ++HP+
Sbjct: 191 GDPIKREEEEEA-LNEVGYDDLGGVRKQLAQIKEMVELPLRHPQ 233
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 685 GAPKKKHETGSAKMVKIGFEDIGGLSDIITXICDLI-LHMKHPE 813
G P K+ E + M IG++D+GG+ + I +++ L ++HP+
Sbjct: 192 GDPIKREEEEES-MNDIGYDDLGGVRKQLAQIKEMVELPLRHPQ 234
>AF016687-4|AAC48097.1| 183|Caenorhabditis elegans Hypothetical
protein T21D12.12 protein.
Length = 183
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 87 TNNTETKSLGNEENSQYKAKNFE*SRNSVTCKKLFGRKCGQNVCRCQSNGA 239
T+ + GN Q A++F +N+ TC+ F + C N R QS A
Sbjct: 21 TDCFSARDTGNSGCGQQGARSFYFHKNTRTCQPFFYQGCDGNSNRFQSKEA 71
>Z68752-11|CAM82780.1| 324|Caenorhabditis elegans Hypothetical
protein T12G3.7b protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 451 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 612
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 33 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 86
Query: 613 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 702
IES K +N +KK +L + K P K
Sbjct: 87 IIES--KTEN---EKKEELLTGKEETPPAK 111
>Z68752-10|CAA92986.1| 354|Caenorhabditis elegans Hypothetical
protein T12G3.7a protein.
Length = 354
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 451 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 612
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 63 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 116
Query: 613 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 702
IES K +N +KK +L + K P K
Sbjct: 117 IIES--KTEN---EKKEELLTGKEETPPAK 141
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 592 PARTNSTAIE-SALKQQNQPLDKKRKL 669
P +T+S++ SA KQ+N P+D+K KL
Sbjct: 450 PRKTSSSSTTTSAKKQKNPPIDEKEKL 476
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 592 PARTNSTAIE-SALKQQNQPLDKKRKL 669
P +T+S++ SA KQ+N P+D+K KL
Sbjct: 518 PRKTSSSSTTTSAKKQKNPPIDEKEKL 544
>AL023840-2|CAM82781.1| 324|Caenorhabditis elegans Hypothetical
protein T12G3.7b protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 451 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 612
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 33 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 86
Query: 613 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 702
IES K +N +KK +L + K P K
Sbjct: 87 IIES--KTEN---EKKEELLTGKEETPPAK 111
>AL023840-1|CAA19510.1| 354|Caenorhabditis elegans Hypothetical
protein T12G3.7a protein.
Length = 354
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 451 DKKRPAASRRPTDKAGEPIDILSSDEDGSAAPKLPKIND--QITITPH----IPARTNST 612
D RP +K G+ S E + P L ++ +TI P IP TN+T
Sbjct: 63 DDVRPPIDENENEKEGK------SSEKSTTPPTLTLLSSTANLTIAPDQVAPIPVATNAT 116
Query: 613 AIESALKQQNQPLDKKRKLDSNKSGAPKKK 702
IES K +N +KK +L + K P K
Sbjct: 117 IIES--KTEN---EKKEELLTGKEETPPAK 141
>AF016438-12|AAK84532.1| 407|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 134 protein.
Length = 407
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 162 RNSVTCKKLFGRKCGQNVCRCQSNGAF 242
R + TC ++FGR C C+ NG F
Sbjct: 36 RRAATCSRIFGR-CPNGNCKLLENGKF 61
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 703 HETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHP 810
H K +KI F+D+ G S+ I + + ++K+P
Sbjct: 272 HSVEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNP 307
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 703 HETGSAKMVKIGFEDIGGLSDIITXICDLILHMKHP 810
H K +KI F+D+ G S+ I + + ++K+P
Sbjct: 272 HSVEGKKQLKIKFKDVAGCSEAKVEIREFVDYLKNP 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,137,703
Number of Sequences: 27780
Number of extensions: 371873
Number of successful extensions: 1345
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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