Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I19
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.7  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   2.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.2  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/51 (19%), Positives = 25/51 (49%)
 Frame = +1

Query: 565 PT*SAGTRTWTASSSENRPKESTQLWNMNPFPAWWSV*RSSPQRNPSVLRN 717
           P+   GT  +T+S  +    + + + ++ P+P    +   + Q  PS+ ++
Sbjct: 458 PSTELGTNIYTSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQTEPSIYQH 508


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +2

Query: 602 HHQRTDRRRV-LSFGT*IRSRRGGVFEDHHR----SEIRAYCEIRFRLRREXGPQEGDRR 766
           +H  T RRR+ ++    +  R+  ++  + R     E+RA  EI  + RRE   QE  ++
Sbjct: 28  NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQ 87

Query: 767 PQGQHHE 787
            Q +  +
Sbjct: 88  QQQEKQQ 94


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -2

Query: 386 IHFRKEKGFKVHWNAGRLENFLYSVDKLRTYTVPR 282
           +  +KE G+KV W+  +    +Y  D+   +  P+
Sbjct: 303 VELQKEGGWKVVWDDTQKNTHMYKGDQWVAFDSPK 337


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/57 (26%), Positives = 22/57 (38%)
 Frame = +1

Query: 565  PT*SAGTRTWTASSSENRPKESTQLWNMNPFPAWWSV*RSSPQRNPSVLRNSLSTTP 735
            P  + G  T  +S+    P      W   P   WWS   +SP    +  R + +T P
Sbjct: 1015 PQVTTGVDTGASSTEHMHPD-----WTTKP-STWWSSTTTSPWWTTTTTRRTTTTRP 1065


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +2

Query: 602 HHQRTDRRRV-LSFGT*IRSRRGGVFEDHHR----SEIRAYCEIRFRLRREXGPQEGDRR 766
           +H  T RRR+ ++    +  R+  ++  + R     E+RA  EI  + RRE   QE  ++
Sbjct: 179 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQ 238

Query: 767 PQGQHHE 787
            Q +  +
Sbjct: 239 QQQEKQQ 245


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +2

Query: 602 HHQRTDRRRV-LSFGT*IRSRRGGVFEDHHR----SEIRAYCEIRFRLRREXGPQEGDRR 766
           +H  T RRR+ ++    +  R+  ++  + R     E+RA  EI  + RRE   QE  ++
Sbjct: 238 NHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQ 297

Query: 767 PQGQHHE 787
            Q +  +
Sbjct: 298 QQQEKQQ 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,211
Number of Sequences: 336
Number of extensions: 4762
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)