Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I17
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70212-10|CAA94169.2|  319|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z50177-8|CAA90548.2|  319|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF067607-1|AAY86220.1|  342|Caenorhabditis elegans Hypothetical ...    29   3.1  
AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical ...    29   5.5  
AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical ...    29   5.5  
AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical ...    29   5.5  

>Z70212-10|CAA94169.2|  319|Caenorhabditis elegans Hypothetical
           protein R04D3.10 protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/75 (30%), Positives = 34/75 (45%)
 Frame = -2

Query: 630 FTEQFV*GFEFPYFLKLCIVAEYSVSQFPTVPDRFPETTLYNLPSLFQMAITVAIFKWIK 451
           F  QF  G  F YF  LCI    +V++   + + F E  ++    LF  A  +AI   I 
Sbjct: 80  FGAQFSLGATFSYFHSLCISVLMTVNRLAIILNPFSE--MFTQRRLFGYAAVIAIVVLIS 137

Query: 450 ALI*TRHPYKLMIPL 406
            LI    P +++  L
Sbjct: 138 LLIPYFTPCRIIFML 152


>Z50177-8|CAA90548.2|  319|Caenorhabditis elegans Hypothetical
           protein R04D3.10 protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/75 (30%), Positives = 34/75 (45%)
 Frame = -2

Query: 630 FTEQFV*GFEFPYFLKLCIVAEYSVSQFPTVPDRFPETTLYNLPSLFQMAITVAIFKWIK 451
           F  QF  G  F YF  LCI    +V++   + + F E  ++    LF  A  +AI   I 
Sbjct: 80  FGAQFSLGATFSYFHSLCISVLMTVNRLAIILNPFSE--MFTQRRLFGYAAVIAIVVLIS 137

Query: 450 ALI*TRHPYKLMIPL 406
            LI    P +++  L
Sbjct: 138 LLIPYFTPCRIIFML 152


>AF067607-1|AAY86220.1|  342|Caenorhabditis elegans Hypothetical
           protein C18H7.10 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/32 (34%), Positives = 24/32 (75%)
 Frame = -2

Query: 426 YKLMIPLITSYLWFWRSVSINRSTVLHVIQNG 331
           Y +++PLITS+L+++   +++R +V +V + G
Sbjct: 87  YDIIVPLITSFLFYFARKNLSRQSVYNVEKCG 118


>AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical
           protein T04B8.5c protein.
          Length = 836

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 647 SSSSRYSLNN---LCKALNFHIFLNFVL*LSIVLASSRLSLIGFQRLLSITSH 498
           ++SSRY L N   +    NFH     +   S  L SS  +LIG  R+L+  SH
Sbjct: 259 TTSSRYLLQNDYTVMMDTNFHRVFILIGIFSTTLFSSMSNLIGSSRVLNRLSH 311


>AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical
           protein T04B8.5b protein.
          Length = 939

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 647 SSSSRYSLNN---LCKALNFHIFLNFVL*LSIVLASSRLSLIGFQRLLSITSH 498
           ++SSRY L N   +    NFH     +   S  L SS  +LIG  R+L+  SH
Sbjct: 362 TTSSRYLLQNDYTVMMDTNFHRVFILIGIFSTTLFSSMSNLIGSSRVLNRLSH 414


>AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical
           protein T04B8.5a protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 647 SSSSRYSLNN---LCKALNFHIFLNFVL*LSIVLASSRLSLIGFQRLLSITSH 498
           ++SSRY L N   +    NFH     +   S  L SS  +LIG  R+L+  SH
Sbjct: 375 TTSSRYLLQNDYTVMMDTNFHRVFILIGIFSTTLFSSMSNLIGSSRVLNRLSH 427


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,527,920
Number of Sequences: 27780
Number of extensions: 395626
Number of successful extensions: 993
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)