Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I13
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.016
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   4.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -1

Query: 98  LIF*TLSLSLLCDYEAFYSFVLRKIHISLLI 6
           L+F  + + LLC Y  +Y+F+L  +H+ LL+
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLLLV 256



 Score = 25.0 bits (52), Expect = 0.62
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 71  LLCDYEAFYSFVLRKIHISLLI 6
           LLC Y  +Y+F++  +H+  L+
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLL 131



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 222 VYYFVYPLFWII 187
           +YYFV PLF+++
Sbjct: 133 IYYFVVPLFFLL 144



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 98  LIF*TLSLSLLCDYEAFYSFVLRKIHI 18
           +IF    L LLC Y  F +F++  +H+
Sbjct: 154 IIFTVHLLFLLCIYHFFCAFIIFTMHL 180



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 107 FLPLIF*TLSLSLLCDYEAFYSFVL 33
           + P I  T+   LLC Y  +Y+F++
Sbjct: 86  YCPFIIFTVHF-LLCTYYFYYAFII 109



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 71  LLCDYEAFYSFVLRKIHISLLI 6
           LLC Y  + +F++  +H+  L+
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLL 164


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 426 GDGTIDFREFLCALSVTSRGKLEQK 500
           G  TIDFR+  C+ S   + +  +K
Sbjct: 51  GSKTIDFRKIQCSNSPLRKARYTEK 75


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -1

Query: 674 PVHLTEYFVGAFLW 633
           P+H + Y  G ++W
Sbjct: 122 PIHTSSYMTGIWVW 135


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -1

Query: 674 PVHLTEYFVGAFLW 633
           P+H + Y  G ++W
Sbjct: 355 PIHTSSYMTGIWVW 368


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -1

Query: 674 PVHLTEYFVGAFLW 633
           P+H + Y  G ++W
Sbjct: 355 PIHTSSYMTGIWVW 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,747
Number of Sequences: 336
Number of extensions: 4408
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)