Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I08
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha...    29   4.1  
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros...    29   4.1  
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro...    29   4.1  
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA...    29   4.1  
BT003467-1|AAO39470.1|  640|Drosophila melanogaster RE70810p pro...    28   9.5  
AE014297-1561|AAF54843.3|  435|Drosophila melanogaster CG11608-P...    28   9.5  
AE014296-2127|AAF49930.2|  640|Drosophila melanogaster CG32105-P...    28   9.5  

>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
            protein.
          Length = 1639

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 264  TIQKNLEENFTRKMGELETQIQSAGLRNAILLD 166
            TIQKNL + +  ++ EL+ ++Q+ GL +  L D
Sbjct: 1597 TIQKNLIDKYDAELRELKDEVQNIGLISKALPD 1629


>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
            Drosophila mRNA forlaminin B2 chain. ).
          Length = 1639

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 264  TIQKNLEENFTRKMGELETQIQSAGLRNAILLD 166
            TIQKNL + +  ++ EL+ ++Q+ GL +  L D
Sbjct: 1597 TIQKNLIDKYDAELRELKDEVQNIGLISKALPD 1629


>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p protein.
          Length = 1639

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 264  TIQKNLEENFTRKMGELETQIQSAGLRNAILLD 166
            TIQKNL + +  ++ EL+ ++Q+ GL +  L D
Sbjct: 1597 TIQKNLIDKYDAELRELKDEVQNIGLISKALPD 1629


>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
            protein.
          Length = 1639

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 264  TIQKNLEENFTRKMGELETQIQSAGLRNAILLD 166
            TIQKNL + +  ++ EL+ ++Q+ GL +  L D
Sbjct: 1597 TIQKNLIDKYDAELRELKDEVQNIGLISKALPD 1629


>BT003467-1|AAO39470.1|  640|Drosophila melanogaster RE70810p
           protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +3

Query: 96  QLFHSCYLMTCSISCLDNYDSILGPAGS---HSEVPQ 197
           QL H+CY+    + C  +YD + G   S   H+ +PQ
Sbjct: 308 QLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQ 344


>AE014297-1561|AAF54843.3|  435|Drosophila melanogaster CG11608-PA
           protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -2

Query: 336 TFNHLSDILFLTLKPIMSQLAEILTIQKNLEENFTRKMGELETQIQSAGLRN 181
           T+NH+  +L   +  +++    ++ I K  EEN   K+G ++ +I    L N
Sbjct: 384 TWNHMDFLLANNINELINN--PVIKIIKTFEENIKHKIGNIKGEISIDALLN 433


>AE014296-2127|AAF49930.2|  640|Drosophila melanogaster CG32105-PB
           protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +3

Query: 96  QLFHSCYLMTCSISCLDNYDSILGPAGS---HSEVPQ 197
           QL H+CY+    + C  +YD + G   S   H+ +PQ
Sbjct: 308 QLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQ 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,013,190
Number of Sequences: 53049
Number of extensions: 415243
Number of successful extensions: 816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)