Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I07
         (493 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1691 - 39215192-39215283,39215341-39215413,39215874-392166...    29   2.0  
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535...    28   3.5  
03_03_0043 + 14016958-14017106,14017198-14017291,14018488-140185...    27   6.2  

>01_06_1691 -
           39215192-39215283,39215341-39215413,39215874-39216615,
           39216730-39217985,39218080-39218187,39218289-39218474,
           39218625-39218675
          Length = 835

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = +1

Query: 142 IDPGKKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNVNRFDSLNECVKACDPAKLSLE 321
           I+  +  E  + EYV  Y Y+L  RK  KF  S  G      D+ ++    C P  L +E
Sbjct: 205 IEKARSDEDKRKEYVVSYLYNL-MRKYSKFFRSEAGD-----DTDSQGSSPCSPTILGME 258

Query: 322 NYY 330
           + Y
Sbjct: 259 DMY 261


>02_01_0717 +
           5351504-5351602,5353401-5353499,5353574-5353675,
           5353756-5353815,5353900-5354006,5354114-5354196,
           5354372-5354462,5354561-5354768
          Length = 282

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 154 KKTEKNKSEYVTKYAYDLNKRKCIKFPYSGYGGNVNRFDSLNECVKACDPAKLSLENY 327
           K TE +  E+  KY    +++K +K  Y+ + GN+NR      C   C   KL    +
Sbjct: 120 KVTEADIEEFEAKYRGSDSEKKDLKDLYTKFKGNMNRL----FCSMICSDPKLDSHRF 173


>03_03_0043 +
           14016958-14017106,14017198-14017291,14018488-14018582,
           14018658-14018825,14019091-14019163,14019236-14019288,
           14019720-14019811,14020141-14020193,14020272-14020397,
           14020710-14020955
          Length = 382

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 145 DPGKKTEKNKSEYVTKYAYD 204
           DPG  T +N S+Y++ Y YD
Sbjct: 134 DPGTVTAENVSQYLSAYPYD 153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,664,937
Number of Sequences: 37544
Number of extensions: 154972
Number of successful extensions: 310
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)