Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_I01
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 597 INYTSYGIHAEEVVSDIVIKK 535
           I+Y+      EEV+SD+ + K
Sbjct: 185 ISYSQRMARVEEVISDLALSK 205


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 597 INYTSYGIHAEEVVSDIVIKK 535
           I+Y+      EEV+SD+ + K
Sbjct: 185 ISYSQRMARVEEVISDLALSK 205


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 13 ELEAKPIHFENLQKWRLLCQ 72
          E+  KPIH E  Q W    Q
Sbjct: 10 EMMGKPIHEEVAQVWEQTLQ 29


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 345 IRNYLKNNRQKGNFKQKNRNFILLC 419
           +R++  +N+Q     Q + N  +LC
Sbjct: 210 MRSFFSDNKQDDKIPQISDNLYILC 234


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 345 IRNYLKNNRQKGNFKQKNRNFILLC 419
           +R++  +N+Q     Q + N  +LC
Sbjct: 210 MRSFFSDNKQDDKIPQISDNLYILC 234


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 359 KIIPYSNLCNN 327
           K++P   LCNN
Sbjct: 148 KVVPLKKLCNN 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,313
Number of Sequences: 336
Number of extensions: 2190
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)