Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_H23
(486 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66699-1|CAA47244.1| 92|Homo sapiens ribosomal protein L37a pr... 152 7e-37
L06499-1|AAA60280.1| 92|Homo sapiens ribosomal protein L37a pr... 152 7e-37
CR542152-1|CAG46949.1| 92|Homo sapiens RPL37A protein. 152 7e-37
BC082239-1|AAH82239.1| 92|Homo sapiens ribosomal protein L37a ... 152 7e-37
BC067789-1|AAH67789.1| 92|Homo sapiens ribosomal protein L37a ... 152 7e-37
BC016748-1|AAH16748.1| 92|Homo sapiens ribosomal protein L37a ... 152 7e-37
BC014262-1|AAH14262.1| 92|Homo sapiens ribosomal protein L37a ... 152 7e-37
AC073321-2|AAY15078.1| 92|Homo sapiens unknown protein. 152 7e-37
BC000555-1|AAH00555.2| 91|Homo sapiens RPL37A protein protein. 150 3e-36
BC063476-1|AAH63476.1| 72|Homo sapiens RPL37A protein protein. 130 3e-30
AF174595-1|AAF04516.1| 173|Homo sapiens F-box protein Fbx3 prot... 29 6.6
BC025728-1|AAH25728.1| 556|Homo sapiens ZNF671 protein protein. 29 8.7
AK027159-1|BAB15677.1| 534|Homo sapiens protein ( Homo sapiens ... 29 8.7
>X66699-1|CAA47244.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>L06499-1|AAA60280.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>CR542152-1|CAG46949.1| 92|Homo sapiens RPL37A protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC082239-1|AAH82239.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC067789-1|AAH67789.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC016748-1|AAH16748.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC014262-1|AAH14262.1| 92|Homo sapiens ribosomal protein L37a
protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>AC073321-2|AAY15078.1| 92|Homo sapiens unknown protein.
Length = 92
Score = 152 bits (368), Expect = 7e-37
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 MKTVAGGAWTYNTTSAVTVKSAIRRLKELK 90
>BC000555-1|AAH00555.2| 91|Homo sapiens RPL37A protein protein.
Length = 91
Score = 150 bits (363), Expect = 3e-36
Identities = 65/89 (73%), Positives = 77/89 (86%)
Frame = +3
Query: 69 AKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCK 248
AKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 60
Query: 249 RTVAGGAWVFSTTAASSCRSAVRRLREVK 335
+TVAGGAW ++TT+A + +SA+RRL+E+K
Sbjct: 61 KTVAGGAWTYNTTSAVTVKSAIRRLKELK 89
>BC063476-1|AAH63476.1| 72|Homo sapiens RPL37A protein protein.
Length = 72
Score = 130 bits (314), Expect = 3e-30
Identities = 56/71 (78%), Positives = 61/71 (85%)
Frame = +3
Query: 66 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 245
MAKRTKKVGI GKYGTRYGASLRKMVKK+E++QHAKYTCSFCGK MKR VGIW C C
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 60
Query: 246 KRTVAGGAWVF 278
+TVAGGAW +
Sbjct: 61 MKTVAGGAWTY 71
>AF174595-1|AAF04516.1| 173|Homo sapiens F-box protein Fbx3
protein.
Length = 173
Score = 29.5 bits (63), Expect = 6.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 65 NGQTYQKGWNYWQIWHTL 118
NGQ W YW+ WH L
Sbjct: 148 NGQKLVGSWGYWEAWHCL 165
>BC025728-1|AAH25728.1| 556|Homo sapiens ZNF671 protein protein.
Length = 556
Score = 29.1 bits (62), Expect = 8.7
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 FFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAK-YTCSFCGK 197
FF +S + R +R + G GK+ + S +++ EV A+ Y CS CGK
Sbjct: 349 FFRQISGLIEHRRVHTGERLYQCGKCGKFFS----SKSNLIRHQEVHTGARPYVCSECGK 404
Query: 198 DAMKR 212
+ ++
Sbjct: 405 EFSRK 409
>AK027159-1|BAB15677.1| 534|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23506 fis, clone LNG03055. ).
Length = 534
Score = 29.1 bits (62), Expect = 8.7
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 FFFSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAK-YTCSFCGK 197
FF +S + R +R + G GK+ + S +++ EV A+ Y CS CGK
Sbjct: 349 FFRQISGLIEHRRVHTGERLYQCGKCGKFFS----SKSNLIRHQEVHTGARPYVCSECGK 404
Query: 198 DAMKR 212
+ ++
Sbjct: 405 EFSRK 409
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,984,212
Number of Sequences: 237096
Number of extensions: 1233947
Number of successful extensions: 3761
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3758
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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